RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 IRX4P78413 519 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 ZNF33AQ06730 810 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 KCNH2Q12809 1159 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 TCEAL6Q6IPX3 200 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 FMNL3Q8IVF7 1028 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 PGBD3Q8N328 593 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 PPM1KQ8N3J5 372 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 RLN3Q8WXF3 142 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 DNASE2BQ8WZ79 361 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 TFAP2BQ92481 460 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 PIGKQ92643 395 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 TCEAL3Q969E4 200 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 P2RY11Q96G91 374 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 ACOX2Q99424 681 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 ITM2CQ9NQX7 267 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 SUSD2Q9UGT4 822 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 ANGPTL2Q9UKU9 493 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 GTPBP10A4D1E9 387 aaKnown RBP15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 C4orf47A7E2U8 309 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 AFPP02771 609 aaKnown RBP15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 RPL6Q02878 288 aaKnown RBP15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 ZBTB16Q05516 673 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 SLC14A1Q13336 389 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 HNRNPDQ14103 355 aaKnown RBP15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 GEN1Q17RS7 908 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 TRIM61Q5EBN2 209 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 SYCP2LQ5T4T6 812 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 KIAA1211LQ6NV74 962 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 PMF1Q6P1K2 205 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 TMEFF1Q8IYR6 380 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 KDM1BQ8NB78 822 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 GOLGA1Q92805 767 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 ERCC4Q92889 916 aaPredicted RBP15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 TMA16Q96EY4 203 aaKnown RBP15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 DDX50Q9BQ39 737 aaKnown RBP15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 ZDHHC5Q9C0B5 715 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 SMOC1Q9H4F8 434 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 INVSQ9Y283 1065 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 PCDHB4Q9Y5E5 795 aa15.12■□□□□ 0.01
SMARCE1-216ENST00000580419 RNF225M0QZC1 329 aaPredicted RBP15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 LTFP02788 710 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 NCAM1P13591 858 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 GPD2P43304 727 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 SLC11A2P49281 568 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 UBE2HP62256 183 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 MTA1Q13330 715 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 CAMK2GQ13555 558 aaPredicted RBP15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 ARID5BQ14865 1188 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 FUT11Q495W5 492 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 N4BP2L1Q5TBK1 243 aaPredicted RBP15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 UBA3Q8TBC4 463 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 DDI1Q8WTU0 396 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 ZSWIM1Q9BR11 485 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 PRDM16Q9HAZ2 1276 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 TMEM74BQ9NUR3 256 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 TMEM51Q9NW97 253 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 CACNA2D2Q9NY47 1150 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 PLK2Q9NYY3 685 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 KIAA1468Q9P260 1216 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 RWDD2AQ9UIY3 292 aa15.11■□□□□ 0.01
SMARCE1-216ENST00000580419 MED7O43513 233 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 SYNCRIPO60506 623 aaKnown RBP15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 GABBR2O75899 941 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 SYPP08247 313 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 ITPKAP23677 461 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 CD6P30203 668 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 IL12RB1P42701 662 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 LRMPQ12912 555 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 SEMA3BQ13214 749 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 ZNF234Q14588 700 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 WDR45BQ5MNZ6 344 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 PIP4P1Q86T03 277 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 TMEM110Q86TL2 294 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 AHI1Q8N157 1196 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 KREMEN1Q96MU8 473 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 CNTNAP3BQ96NU0 1288 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 SERPINB11Q96P15 392 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 SRRTQ9BXP5 876 aaKnown RBP15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 SLC4A5Q9BY07 1137 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 CNTNAP3Q9BZ76 1288 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 TMEM245Q9H330 911 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 ZDHHC4Q9NPG8 344 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 DNAAF2Q9NVR5 837 aaKnown RBP15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 WSB2Q9NYS7 404 aaPredicted RBP15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 TLR6Q9Y2C9 796 aa15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 MUC22E2RYF6 1773 aaPredicted RBP15.1■□□□□ 0.01
SMARCE1-216ENST00000580419 PATE3B3GLJ2 98 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 M0QYV0 167 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 NDUFS2O75306 463 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 ATP5BP06576 529 aaKnown RBP15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 GLI1P08151 1106 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 HMBSP08397 361 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 GNSP15586 552 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 ENGP17813 658 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 HLA-FP30511 346 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 GFPT1Q06210 699 aaPredicted RBP15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 PIK3R6Q5UE93 754 aa15.09■□□□□ 0.01
SMARCE1-216ENST00000580419 TMEM215Q68D42 235 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms