RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ZNF518BQ9C0D4 1074 aa20.37■□□□□ 0.85
LIMD2-209ENST00000580222 DNAJC17Q9NVM6 304 aaKnown RBP20.37■□□□□ 0.85
LIMD2-209ENST00000580222 GOLGA4Q13439 2230 aaKnown RBP20.37■□□□□ 0.85
LIMD2-209ENST00000580222 A0A1B0GVT2 93 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 MEI4A8MW99 385 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 CLDN5O00501 218 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 TRIM66O15016 1216 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 AFPP02771 609 aaKnown RBP20.36■□□□□ 0.85
LIMD2-209ENST00000580222 C4BPAP04003 597 aaKnown RBP20.36■□□□□ 0.85
LIMD2-209ENST00000580222 TPM2P07951 284 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 IRF1P10914 325 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 WARSP23381 471 aaKnown RBP20.36■□□□□ 0.85
LIMD2-209ENST00000580222 PIK3CAP42336 1068 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 MATKP42679 507 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 CLDN6P56747 220 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 TRPC3Q13507 836 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 PTPRNQ16849 979 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 ZACNQ401N2 412 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 CCDC157Q569K6 752 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 KRT39Q6A163 491 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 SV2AQ7L0J3 742 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 DPH6Q7L8W6 267 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 PDCD7Q8N8D1 485 aaKnown RBP20.36■□□□□ 0.85
LIMD2-209ENST00000580222 RNF214Q8ND24 703 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 SCAMP5Q8TAC9 235 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 HPDLQ96IR7 371 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 CDC6Q99741 560 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 TUBGCP2Q9BSJ2 902 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 MKRN2Q9H000 416 aaKnown RBP20.36■□□□□ 0.85
LIMD2-209ENST00000580222 DPEP3Q9H4B8 488 aa20.36■□□□□ 0.85
LIMD2-209ENST00000580222 PES1O00541 588 aaKnown RBP20.35■□□□□ 0.85
LIMD2-209ENST00000580222 KCNK3O14649 394 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 BCAT2O15382 392 aaPredicted RBP20.35■□□□□ 0.85
LIMD2-209ENST00000580222 ZBTB24O43167 697 aaPredicted RBP20.35■□□□□ 0.85
LIMD2-209ENST00000580222 TLX3O43711 291 aaPredicted RBP20.35■□□□□ 0.85
LIMD2-209ENST00000580222 CISD3P0C7P0 127 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 ZNF18P17022 549 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 FMO5P49326 533 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 MCCD1P59942 119 aaPredicted RBP20.35■□□□□ 0.85
LIMD2-209ENST00000580222 KCNH2Q12809 1159 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 FUT11Q495W5 492 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 DCAF12L1Q5VU92 463 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 SDE2Q6IQ49 451 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 PCSK4Q6UW60 755 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 DHRS13Q6UX07 377 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 ZNF605Q86T29 641 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 GALNT15Q8N3T1 639 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 SLITRK1Q96PX8 696 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 B3GNT5Q9BYG0 378 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 HSD3B7Q9H2F3 369 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 ITM2CQ9NQX7 267 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 TAB2Q9NYJ8 693 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 USP36Q9P275 1121 aaKnown RBP20.35■□□□□ 0.85
LIMD2-209ENST00000580222 SH3BP1Q9Y3L3 701 aa20.35■□□□□ 0.85
LIMD2-209ENST00000580222 METTL12A8MUP2 240 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 NEDD8-MDP1E9PL57 170 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 PLK4O00444 970 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 CER1O95813 267 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 HLA-DRAP01903 254 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 YWHAQP27348 245 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 CSNK1EP49674 416 aaKnown RBP20.34■□□□□ 0.85
LIMD2-209ENST00000580222 NCOA4Q13772 614 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 KRT31Q15323 416 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 MAPRE1Q15691 268 aaKnown RBP20.34■□□□□ 0.85
LIMD2-209ENST00000580222 CBWD6Q4V339 395 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 CBWD3Q5JTY5 395 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 CBWD5Q5RIA9 395 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 KCNK16Q96T55 309 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 EHD2Q9NZN4 543 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 EIF2B4Q9UI10 523 aaKnown RBP20.34■□□□□ 0.85
LIMD2-209ENST00000580222 PCDHGB2Q9Y5G2 931 aa20.34■□□□□ 0.85
LIMD2-209ENST00000580222 FLRT2O43155 660 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 CACNG3O60359 315 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 VNN1O95497 513 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 ATP1A3P13637 1013 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 TYRP14679 529 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 EIF2S3P41091 472 aaKnown RBP20.33■□□□□ 0.85
LIMD2-209ENST00000580222 KIF19Q2TAC6 998 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 PREPLQ4J6C6 727 aaPredicted RBP20.33■□□□□ 0.85
LIMD2-209ENST00000580222 HECTD3Q5T447 861 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 METTL3Q86U44 580 aaKnown RBP20.33■□□□□ 0.85
LIMD2-209ENST00000580222 FBXL13Q8NEE6 735 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 CADM4Q8NFZ8 388 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 TAS1R2Q8TE23 839 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 FBXO32Q969P5 355 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 IMPG2Q9BZV3 1241 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 GMIPQ9P107 970 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 LIMA1Q9UHB6 759 aaKnown RBP20.33■□□□□ 0.85
LIMD2-209ENST00000580222 SNX11Q9Y5W9 270 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 STON1Q9Y6Q2 735 aa20.33■□□□□ 0.85
LIMD2-209ENST00000580222 KNL1Q8NG31 2342 aa20.33■□□□□ 0.84
LIMD2-209ENST00000580222 TBX18O95935 607 aa20.32■□□□□ 0.84
LIMD2-209ENST00000580222 CST3P01034 146 aaPredicted RBP20.32■□□□□ 0.84
LIMD2-209ENST00000580222 PTPN1P18031 435 aaKnown RBP20.32■□□□□ 0.84
LIMD2-209ENST00000580222 GNL1P36915 607 aaPredicted RBP20.32■□□□□ 0.84
LIMD2-209ENST00000580222 TPMTP51580 245 aa20.32■□□□□ 0.84
LIMD2-209ENST00000580222 COPB1P53618 953 aaKnown RBP20.32■□□□□ 0.84
LIMD2-209ENST00000580222 MYL6P60660 151 aa20.32■□□□□ 0.84
LIMD2-209ENST00000580222 CETN1Q12798 172 aa20.32■□□□□ 0.84
LIMD2-209ENST00000580222 ZNF699Q32M78 642 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms