RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 GPR158Q5T848 1215 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ZNF658Q5TYW1 1059 aaPredicted RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 ANKRD40Q6AI12 368 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ALG1LQ6GMV1 187 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 KLHL10Q6JEL2 608 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ATG14Q6ZNE5 492 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ZNF771Q7L3S4 317 aaPredicted RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 HS2ST1Q7LGA3 356 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ETFBKMTQ8IXQ9 262 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 LSMEM2Q8N112 164 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 OR5B17Q8NGF7 314 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 CXorf38Q8TB03 319 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 FGF11Q92914 225 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 PSMG2Q969U7 264 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 HVCN1Q96D96 273 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 RSPRY1Q96DX4 576 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ZNF578Q96N58 590 aaPredicted RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 GSDMAQ96QA5 445 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 TSPAN18Q96SJ8 248 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 DPH1Q9BZG8 443 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 DMAC2Q9NW81 257 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 CEP72Q9P209 647 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 STIM2Q9P246 746 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.59□□□□□ -1.83
CDH19-204ENST00000579658 V9GYY5 206 aaPredicted RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 HELZP42694 1942 aaKnown RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 NAV2Q8IVL1 2488 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ADAMTS9Q9P2N4 1935 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ITPR1Q14643 2758 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 CCDC66A2RUB6 948 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 H0YCG3 227 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 EIF1AYO14602 144 aaKnown RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 TERTO14746 1132 aaKnown RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 YKT6O15498 198 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 LDHAP00338 332 aaKnown RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 AFPP02771 609 aaKnown RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 CLTAP09496 248 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 PNMA6AP0CW24 399 aaPredicted RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 GARTP22102 1010 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 TKTP29401 623 aaKnown RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 MATKP42679 507 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 GRK6P43250 576 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 TNFRSF4P43489 277 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 PLA2G4AP47712 749 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 IFNAR2P48551 515 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 TUFMP49411 452 aaKnown RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 GALK1P51570 392 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 UPP1Q16831 310 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 PTPRNQ16849 979 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.59□□□□□ -1.83
CDH19-204ENST00000579658 CTXN3Q4LDR2 81 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 C2orf27AQ580R0 203 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 C1orf220Q5T0J3 134 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 RSRC2Q7L4I2 434 aaKnown RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 SLCO6A1Q86UG4 719 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 GPD1LQ8N335 351 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 TRIML1Q8N9V2 468 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 MLKLQ8NB16 471 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 LRRN4CLQ8ND94 238 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ZNF248Q8NDW4 579 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 MDGA1Q8NFP4 955 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 SPATA18Q8TC71 538 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 EAF1Q96JC9 268 aaPredicted RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 SUSD3Q96L08 255 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 C8orf48Q96LL4 319 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ARHGAP9Q9BRR9 750 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 TRIM56Q9BRZ2 755 aaKnown RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 ATXN3LQ9H3M9 355 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 RPF1Q9H9Y2 349 aaKnown RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 PPCSQ9HAB8 311 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 HPS4Q9NQG7 708 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.59□□□□□ -1.83
CDH19-204ENST00000579658 GKN1Q9NS71 199 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 INTS13Q9NVM9 706 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 ARGLU1Q9NWB6 273 aaPredicted RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 DNAI1Q9UI46 699 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 FBXL5Q9UKA1 691 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 EXOC7Q9UPT5 735 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 CTNND2Q9UQB3 1225 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 TIMM13Q9Y5L4 95 aaPredicted RBP3.59□□□□□ -1.83
CDH19-204ENST00000579658 USP3Q9Y6I4 520 aa3.59□□□□□ -1.83
CDH19-204ENST00000579658 NCANO14594 1321 aa3.59□□□□□ -1.84
CDH19-204ENST00000579658 ZNF638Q14966 1978 aaKnown RBP3.59□□□□□ -1.84
CDH19-204ENST00000579658 TTC36A6NLP5 189 aa3.58□□□□□ -1.84
CDH19-204ENST00000579658 HCRTO43612 131 aa3.58□□□□□ -1.84
CDH19-204ENST00000579658 B3GAT3O94766 335 aa3.58□□□□□ -1.84
CDH19-204ENST00000579658 SEC24AO95486 1093 aa3.58□□□□□ -1.84
CDH19-204ENST00000579658 SERPINC1P01008 464 aa3.58□□□□□ -1.84
CDH19-204ENST00000579658 CST3P01034 146 aaPredicted RBP3.58□□□□□ -1.84
CDH19-204ENST00000579658 NR3C1P04150 777 aa3.58□□□□□ -1.84
CDH19-204ENST00000579658 MYL1P05976 194 aa3.58□□□□□ -1.84
CDH19-204ENST00000579658 TRIM49P0CI25 452 aa3.58□□□□□ -1.84
CDH19-204ENST00000579658 TRIM49CP0CI26 452 aa3.58□□□□□ -1.84
CDH19-204ENST00000579658 KCNE1P15382 129 aa3.58□□□□□ -1.84
CDH19-204ENST00000579658 JUNDP17535 347 aa3.58□□□□□ -1.84
CDH19-204ENST00000579658 GJA4P35212 333 aa3.58□□□□□ -1.84
CDH19-204ENST00000579658 AVPR1AP37288 418 aa3.58□□□□□ -1.84
CDH19-204ENST00000579658 YARSP54577 528 aaKnown RBP3.58□□□□□ -1.84
CDH19-204ENST00000579658 PCBP4P57723 403 aaKnown RBP3.58□□□□□ -1.84
CDH19-204ENST00000579658 TUBB4BP68371 445 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms