RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	TOR4A	Q9NXH8	423 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	MARCH2	Q9P0N8	246 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	FBXO10	Q9UK96	956 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	STRIP2	Q9ULQ0	834 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	MAPK8IP1	Q9UQF2	711 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	ZNF510	Q9Y2H8	683 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	FRMD4B	Q9Y2L6	1034 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	SNX11	Q9Y5W9	270 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	SMG1	Q96Q15	3661 aa	Known RBP	10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	EIF4E1B	A6NMX2	242 aa	Known RBP	10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	FLRT2	O43155	660 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	PDIA4	P13667	645 aa	Known RBP	10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	NR2F2	P24468	414 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	CLDN6	P56747	220 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	YWHAG	P61981	247 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	PPP3CA	Q08209	521 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	IL27RA	Q6UWB1	636 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	TMPRSS7	Q7RTY8	843 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	ADAT2	Q7Z6V5	191 aa	Known RBP	10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	GLRX5	Q86SX6	157 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	PIGZ	Q86VD9	579 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	SLC9A9	Q8IVB4	645 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	CCDC150	Q8NCX0	1101 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	BAHD1	Q8TBE0	780 aa	Predicted RBP	10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	PAGE5	Q96GU1	130 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	BBC3	Q96PG8	261 aa	Predicted RBP	10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	CDK5RAP1	Q96SZ6	601 aa	Known RBP	10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	DCLK3	Q9C098	648 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	PNPLA8	Q9NP80	782 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	CLIC5	Q9NZA1	410 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	LOC400499	M0QZD8	3231 aa		10.07	□□□□□ -0.8
MSI2-208	ENST00000579466	TRABD2B	A6NFA1	517 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	FAM47DP	A6NHR8	397 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	TULP2	O00295	520 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	PDXK	O00764	312 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	NPC1	O15118	1278 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	MSI1	O43347	362 aa	Known RBP	10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	ACTN4	O43707	911 aa	Known RBP	10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	CALU	O43852	315 aa	Predicted RBP	10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	SEMA4F	O95754	770 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	ZNF883	P0CG24	379 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	KRT13	P13646	458 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	HOXD9	P28356	352 aa	Predicted RBP	10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	HLA-F	P30511	346 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	AFF3	P51826	1226 aa	Known RBP	10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	TKTL1	P51854	596 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	ENPP2	Q13822	863 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	EIF4H	Q15056	248 aa	Known RBP	10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	TEAD4	Q15561	434 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	GOLGA7B	Q2TAP0	167 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	DHRS13	Q6UX07	377 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	CHST9	Q7L1S5	443 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	FMNL3	Q8IVF7	1028 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	FAM186B	Q8IYM0	893 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	OR2T3	Q8NH03	318 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	GANC	Q8TET4	914 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	EDEM1	Q92611	657 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	EEF2KMT	Q96G04	330 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	ULBP1	Q9BZM6	244 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	MTG2	Q9H4K7	406 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	CYP3A43	Q9HB55	503 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	TM9SF3	Q9HD45	589 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	ABCB8	Q9NUT2	735 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	SFMBT1	Q9UHJ3	866 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	NFE2L3	Q9Y4A8	694 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	USP3	Q9Y6I4	520 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	SHROOM3	Q8TF72	1996 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466	ASXL3	Q9C0F0	2248 aa		10.06	□□□□□ -0.8
MSI2-208	ENST00000579466		A0A1B0GVL5	298 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466		H0Y8X5	98 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	CBX4	O00257	560 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	IKBKB	O14920	756 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	F13A1	P00488	732 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	IGLV3-19	P01714	112 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	DNTT	P04053	509 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	SLFN14	P0C7P3	912 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	PRR29	P0C7W0	189 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	ZSCAN22	P10073	491 aa	Predicted RBP	10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	PFKFB1	P16118	471 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	CCT8	P50990	548 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	SGSH	P51688	502 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	ZNF132	P52740	706 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	SUZ12	Q15022	739 aa	Known RBP	10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	MPPE1	Q53F39	396 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	KCNT1	Q5JUK3	1230 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	PRAMEF14	Q5SWL7	426 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	INTS8	Q75QN2	995 aa	Known RBP	10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	GATAD2A	Q86YP4	633 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	ARHGAP18	Q8N392	663 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	CPXM2	Q8N436	756 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	SLC4A11	Q8NBS3	891 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	C1orf216	Q8TAB5	229 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	PIP4K2C	Q8TBX8	421 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	RNF139	Q8WU17	664 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	SEMA4D	Q92854	862 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	PLD4	Q96BZ4	506 aa		10.05	□□□□□ -0.8
MSI2-208	ENST00000579466	BIRC7	Q96CA5	298 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms