RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 STK39Q9UEW8 545 aa5.2□□□□□ -1.58
GAPLINC-202ENST00000579007 GIMAP2Q9UG22 337 aa5.2□□□□□ -1.58
GAPLINC-202ENST00000579007 GDF2Q9UK05 429 aaPredicted RBP5.2□□□□□ -1.58
GAPLINC-202ENST00000579007 PCDHA12Q9UN75 941 aa5.2□□□□□ -1.58
GAPLINC-202ENST00000579007 ZZEF1O43149 2961 aa5.2□□□□□ -1.58
GAPLINC-202ENST00000579007 TNRC6BQ9UPQ9 1833 aaKnown RBP5.2□□□□□ -1.58
GAPLINC-202ENST00000579007 USP24Q9UPU5 2620 aa5.2□□□□□ -1.58
GAPLINC-202ENST00000579007 PHLPP2Q6ZVD8 1323 aa5.2□□□□□ -1.58
GAPLINC-202ENST00000579007 EPG5Q9HCE0 2579 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 CHD8Q9HCK8 2581 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 MAP1BP46821 2468 aaKnown RBP5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 ATG2BQ96BY7 2078 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 PP2D1A8MPX8 630 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 TMEM189-UBE2V1I3L0A0 370 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 I3L4J1 428 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 MASP2O00187 686 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 N4BP3O15049 544 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 FANCGO15287 622 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 CCL16O15467 120 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 HOXC11O43248 304 aaPredicted RBP5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 NDUFS2O75306 463 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 BAG4O95429 457 aaKnown RBP5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 DCNP07585 359 aaKnown RBP5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 LAMP2P13473 410 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 CEBPBP17676 345 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 FGFR3P22607 806 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 FCARP24071 287 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 TKTP29401 623 aaKnown RBP5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 HOXA9P31269 272 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 NAMPTP43490 491 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 BRCC3P46736 316 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 CLCNKBP51801 687 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 ZNF445P59923 1031 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 RNF4P78317 190 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 AMPD2Q01433 879 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 SPARCL1Q14515 664 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 POSTNQ15063 836 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 POU4F3Q15319 338 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 ANKRD1Q15327 319 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 USP41Q3LFD5 358 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 ZACNQ401N2 412 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 RILPL1Q5EBL4 403 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 HECTD3Q5T447 861 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 MFSD4BQ5TF39 518 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 NT5DC1Q5TFE4 455 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 FAM171A1Q5VUB5 890 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 IQCEQ6IPM2 695 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 PARM1Q6UWI2 310 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 KCNK18Q7Z418 384 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 GRASPQ7Z6J2 395 aaPredicted RBP5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 C12orf40Q86WS4 652 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 CCDC83Q8IWF9 413 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 ZBTB8OSQ8IWT0 167 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 NPAS3Q8IXF0 933 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 GPR65Q8IYL9 337 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 GALNT15Q8N3T1 639 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 SLC44A3Q8N4M1 653 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 C4orf32Q8N8J7 132 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 MCPH1Q8NEM0 835 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 BAHD1Q8TBE0 780 aaPredicted RBP5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 HDAC7Q8WUI4 952 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 ASB12Q8WXK4 309 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 ING5Q8WYH8 240 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 WASF1Q92558 559 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 STAMQ92783 540 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 CCDC47Q96A33 483 aaKnown RBP5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 CCDC43Q96MW1 224 aaKnown RBP5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 TTPALQ9BTX7 342 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 POLR3CQ9BUI4 534 aaPredicted RBP5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 CDT1Q9H211 546 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 MAGEH1Q9H213 219 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 PLEKHA4Q9H4M7 779 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 SLC2A4RGQ9NR83 387 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 IRAK4Q9NWZ3 460 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 IGSF9Q9P2J2 1179 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 MTRRQ9UBK8 725 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 FBXL21Q9UKT6 434 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 GDAQ9Y2T3 454 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 PCDHGB2Q9Y5G2 931 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 R4GN57 208 aa5.19□□□□□ -1.58
GAPLINC-202ENST00000579007 NUP205Q92621 2012 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 WDR27A2RRH5 827 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 CCDC66A2RUB6 948 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 ARHGEF35A5YM69 484 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 DDX3XO00571 662 aaKnown RBP eCLIP5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 ACKR2O00590 384 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 INMTO95050 263 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 C1RP00736 705 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 MAPTP10636 758 aaKnown RBP5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 IDEP14735 1019 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 RHOQP17081 205 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 CYP11B2P19099 503 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 ITIH2P19823 946 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 PROZP22891 400 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 RPA1P27694 616 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 CCR2P41597 374 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 TOB1P50616 345 aaPredicted RBP5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 SNX16P57768 344 aa5.18□□□□□ -1.58
GAPLINC-202ENST00000579007 GSTM4Q03013 218 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms