RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 NELFEP18615 380 aaKnown RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 PPARGP37231 505 aaPredicted RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 PTGIRP43119 386 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 STX5Q13190 355 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 OTUD3Q5T2D3 398 aaPredicted RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 ZNF470Q6ECI4 717 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 KYQ8NBH2 561 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 NDRG1Q92597 394 aaKnown RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 PRPF18Q99633 342 aaKnown RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 THUMPD3Q9BV44 507 aaKnown RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 CDT1Q9H211 546 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 ACSS3Q9H6R3 686 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 CYP3A43Q9HB55 503 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 TRPC7Q9HCX4 862 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 MAP3K20Q9NYL2 800 aaKnown RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 PKD2L2Q9NZM6 624 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 KIAA1257Q9ULG3 409 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 PKP3Q9Y446 797 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 ADM5C9JUS6 153 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 SCAMP3O14828 347 aaKnown RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 ZBTB24O43167 697 aaPredicted RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 ADCYAP1R1P41586 468 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 TGFB2P61812 414 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 BST2Q10589 180 aaKnown RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 CRY2Q49AN0 593 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 UNC5AQ6ZN44 842 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 BBS12Q6ZW61 710 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 NAT9Q9BTE0 207 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 DDX43Q9NXZ2 648 aaKnown RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 MOSPD1Q9UJG1 213 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 SLC30A1Q9Y6M5 507 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 ATP6AP2A0A1C7CYW4 349 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 PRR5-ARHGAP8B1AHC4 643 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 ALOX15BO15296 676 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 GAS2O43903 313 aaKnown RBP12.34□□□□□ -0.43
ERBB2-206ENST00000578373 ATP6AP2O75787 350 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 ESRRBO95718 433 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 MMP8P22894 467 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 ARHGAP8P85298 464 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 SLC6A3Q01959 620 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 DDX39BQ13838 428 aaKnown RBP12.34□□□□□ -0.43
ERBB2-206ENST00000578373 HSDL1Q3SXM5 330 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 ZBTB49Q6ZSB9 765 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 KCNMB4Q86W47 210 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 PIWIL2Q8TC59 973 aaKnown RBP12.34□□□□□ -0.43
ERBB2-206ENST00000578373 PGLYRP2Q96PD5 576 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 RNF157Q96PX1 679 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 PRDM12Q9H4Q4 367 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 KIF17Q9P2E2 1029 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 PNMA8BQ9ULN7 279 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-206ENST00000578373 C2CD2Q9Y426 696 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 SDK1Q7Z5N4 2213 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 TCF4P15884 667 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 GOT1P17174 413 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 PSMC3P17980 439 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 ADSSP30520 456 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 RECQLP46063 649 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-206ENST00000578373 INPP1P49441 399 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 SPDYCQ5MJ68 293 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 RNF43Q68DV7 783 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 CCDC81Q6ZN84 652 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 RIPOR1Q6ZS17 1223 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 GSTCDQ8NEC7 633 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 TSPAN17Q96FV3 270 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 MYH8P13535 1937 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 FKBP9O95302 570 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 ASS1P00966 412 aaKnown RBP12.34□□□□□ -0.43
ERBB2-206ENST00000578373 USP17L7P0C7H9 530 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 EFEMP1Q12805 493 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 FKBP9P1Q75LS8 142 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 LENG9Q96B70 501 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 CEP19Q96LK0 163 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 FRMD8P1Q9BZ68 369 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-206ENST00000578373 CLIC5Q9NZA1 410 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 GPRC5DQ9NZD1 345 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 GGA2Q9UJY4 613 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 EPHA3P29320 983 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 FOXN2P32314 431 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 GTF2H3Q13889 308 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 FNBP1LQ5T0N5 605 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 DNAJC14Q6Y2X3 702 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-206ENST00000578373 CLNKQ7Z7G1 428 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 TTC7BQ86TV6 843 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 PHF13Q86YI8 300 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-206ENST00000578373 EMID1Q96A84 441 aaPredicted RBP12.34□□□□□ -0.43
ERBB2-206ENST00000578373 MUC3BQ9H195 1237 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 NCKIPSDQ9NZQ3 722 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 NOCTQ9UK39 431 aaKnown RBP12.34□□□□□ -0.43
ERBB2-206ENST00000578373 CRYL1Q9Y2S2 319 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 AK5Q9Y6K8 562 aa12.34□□□□□ -0.43
ERBB2-206ENST00000578373 ZC3H4Q9UPT8 1303 aaKnown RBP12.33□□□□□ -0.43
ERBB2-206ENST00000578373 ANXA9O76027 345 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 RECQL4O94761 1208 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 HOXD13P35453 343 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 NCKAP1LP55160 1127 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 KCNK10P57789 538 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 AGAP9Q5VTM2 703 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 TLCD1Q96CP7 247 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 MFSD14AQ96MC6 490 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms