RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PHLDB2Q86SQ0 1253 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 LEMD2Q8NC56 503 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 GDPD5Q8WTR4 605 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 GOLGA1Q92805 767 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 PGAP3Q96FM1 320 aaPredicted RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 PIWIL1Q96J94 861 aaKnown RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 ZNF512Q96ME7 567 aaPredicted RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 SLITRK1Q96PX8 696 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 CNPY3Q9BT09 278 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 TTYH1Q9H313 450 aaPredicted RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 CCSER2Q9H7U1 834 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.36□□□□□ -1.07
COPS3-215ENST00000578317 CHORDC1Q9UHD1 332 aaPredicted RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 ANAPC7Q9UJX3 599 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 VWA8A3KMH1 1905 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 GRID2IPA4D2P6 1211 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 ZNF840PA6NDX5 716 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 KIF2AO00139 706 aaPredicted RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 BUB1O43683 1085 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 BUB1BO60566 1050 aaPredicted RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 F9P00740 461 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 EPCAMP16422 314 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 GPD1P21695 349 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 FLT3P36888 993 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 NAP1L1P55209 391 aaKnown RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 YWHAGP61981 247 aaKnown RBP eCLIP8.36□□□□□ -1.07
COPS3-215ENST00000578317 EIF4EBP2Q13542 120 aaPredicted RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 SLC25A52Q3SY17 297 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 CCDC14Q49A88 953 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 PPM1LQ5SGD2 360 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 KLHDC10Q6PID8 442 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 BNIPLQ7Z465 357 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 ZNF438Q7Z4V0 828 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 BTLAQ7Z6A9 289 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 RBM23Q86U06 439 aaKnown RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 ELMOD1Q8N336 334 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 C17orf53Q8N3J3 647 aaPredicted RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 EFHBQ8N7U6 833 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 JOSD2Q8TAC2 188 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 CLEC4CQ8WTT0 213 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 RXFP2Q8WXD0 754 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 NDRG1Q92597 394 aaKnown RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 CASP10Q92851 521 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 FBXO32Q969P5 355 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 MCEEQ96PE7 176 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 ALS2CR12Q96Q35 445 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 CDK5RAP1Q96SZ6 601 aaKnown RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 NPY6RQ99463 290 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 LRRC3Q9BY71 257 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 TRIM7Q9C029 511 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 MAN1C1Q9NR34 630 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 TLR8Q9NR97 1041 aaKnown RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 DZANK1Q9NVP4 752 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 ALG6Q9Y672 507 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 TSC2P49815 1807 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 GIPC1O14908 333 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 XYLBO75191 536 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 DAB1O75553 588 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 PALMO75781 387 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 MOCS3O95396 460 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 FGF19O95750 216 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 F11P03951 625 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 HOXB8P17481 243 aaPredicted RBP8.35□□□□□ -1.07
COPS3-215ENST00000578317 DESP17661 470 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 PTPN2P17706 415 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 PFKLP17858 780 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 SDC4P31431 198 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 PCK1P35558 622 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 NRIP1P48552 1158 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 TUBP50607 506 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 RNASE9P60153 205 aaKnown RBP8.35□□□□□ -1.07
COPS3-215ENST00000578317 GNG11P61952 73 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 OGDHQ02218 1023 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 MESDQ14696 234 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 GRIN2CQ14957 1233 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 TAF12Q16514 161 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.35□□□□□ -1.07
COPS3-215ENST00000578317 LRRC38Q5VT99 294 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 SYPL2Q5VXT5 272 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 TRNP1Q6NT89 227 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 MSANTD2Q6P1R3 559 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 HFE2Q6ZVN8 426 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 STRADAQ7RTN6 431 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 DAAM2Q86T65 1068 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 DEFB106AQ8N104 65 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 FAM149B1Q96BN6 582 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 NMUR1Q9HB89 426 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.35□□□□□ -1.07
COPS3-215ENST00000578317 TRPM5Q9NZQ8 1165 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 FOXD3Q9UJU5 478 aaPredicted RBP8.35□□□□□ -1.07
COPS3-215ENST00000578317 STAP1Q9ULZ2 295 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 JRKLQ9Y4A0 524 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 MTCH2Q9Y6C9 303 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 CAPN6Q9Y6Q1 641 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 XIRP2A4UGR9 3374 aa8.35□□□□□ -1.07
COPS3-215ENST00000578317 SPTBN5Q9NRC6 3674 aaKnown RBP8.34□□□□□ -1.07
COPS3-215ENST00000578317 KIAA1671Q9BY89 1806 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 A0A1W2PQH9 124 aa8.34□□□□□ -1.07
COPS3-215ENST00000578317 FAM170AA1A519 330 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms