RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 MIS12Q9H081 205 aa13.34□□□□□ -0.27
CCDC57-211ENST00000578187 SPHK2Q9NRA0 654 aa13.34□□□□□ -0.27
CCDC57-211ENST00000578187 ABCC13Q9NSE7 274 aa13.34□□□□□ -0.27
CCDC57-211ENST00000578187 OLA1Q9NTK5 396 aaKnown RBP13.34□□□□□ -0.27
CCDC57-211ENST00000578187 RASAL2Q9UJF2 1139 aa13.34□□□□□ -0.27
CCDC57-211ENST00000578187 NOCTQ9UK39 431 aaKnown RBP13.34□□□□□ -0.27
CCDC57-211ENST00000578187 EML5Q05BV3 1969 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 A0A0A0MRY4 1105 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 GOLGA6L19H0YKK7 550 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 HAX1O00165 279 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 DCLK1O15075 740 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 PAPSS1O43252 624 aaPredicted RBP13.33□□□□□ -0.28
CCDC57-211ENST00000578187 STC2O76061 302 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 GFPT2O94808 682 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 SERPINC1P01008 464 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 LTFP02788 710 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 ADRB1P08588 477 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 STAT1P42224 750 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 DPP6P42658 865 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 FANCCQ00597 558 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 EFEMP1Q12805 493 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 GAB4Q2WGN9 574 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 STPG1Q5TH74 334 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 PMS2CLQ68D20 193 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 RNF43Q68DV7 783 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 Q6ZNB5 142 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 HTR3DQ70Z44 454 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 BEND5Q7L4P6 421 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 CYP2U1Q7Z449 544 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 ZNF677Q86XU0 584 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 MIB1Q86YT6 1006 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 BBS7Q8IWZ6 715 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 ZNF513Q8N8E2 541 aaPredicted RBP13.33□□□□□ -0.28
CCDC57-211ENST00000578187 NAT16Q8N8M0 369 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 IL17RCQ8NAC3 791 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 MDGA1Q8NFP4 955 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 NOX5Q96PH1 765 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 CPXM1Q96SM3 734 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 TSPY26PQ9H489 355 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 MARCH2Q9P0N8 246 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 WDR35Q9P2L0 1181 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 TJP2Q9UDY2 1190 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 STRIP2Q9ULQ0 834 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 CEP83Q9Y592 693 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 CACNA1AO00555 2505 aa13.33□□□□□ -0.28
CCDC57-211ENST00000578187 BCLAF3A2AJT9 711 aaKnown RBP13.32□□□□□ -0.28
CCDC57-211ENST00000578187 NEDD8-MDP1E9PL57 170 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 KHNYNO15037 678 aaKnown RBP13.32□□□□□ -0.28
CCDC57-211ENST00000578187 TULP3O75386 442 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 LSM8O95777 96 aaKnown RBP13.32□□□□□ -0.28
CCDC57-211ENST00000578187 FYNP06241 537 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 COG7P83436 770 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 NR1I3Q14994 352 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 PTPN20Q4JDL3 420 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 C10orf76Q5T2E6 689 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 TAF3Q5VWG9 929 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 GRAMD4Q6IC98 578 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 LPCAT2Q7L5N7 544 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 C12orf40Q86WS4 652 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 SCUBE3Q8IX30 993 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 TERB1Q8NA31 727 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 TMEM35BQ8NCS4 154 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 SLC20A1Q8WUM9 679 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 HMGB4Q8WW32 186 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 EDEM1Q92611 657 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 GOLGA1Q92805 767 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 PIWIL1Q96J94 861 aaKnown RBP13.32□□□□□ -0.28
CCDC57-211ENST00000578187 PPP1R13BQ96KQ4 1090 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 EDEM2Q9BV94 578 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 TRIM62Q9BVG3 475 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 BBS2Q9BXC9 721 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 DNAJC17Q9NVM6 304 aaKnown RBP13.32□□□□□ -0.28
CCDC57-211ENST00000578187 INVSQ9Y283 1065 aa13.32□□□□□ -0.28
CCDC57-211ENST00000578187 GPR179Q6PRD1 2367 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 TCRBV21S2A2A0A5A6 115 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 SGK1O00141 431 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 ERBB2P04626 1255 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 MMEP08473 750 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 PBX1P40424 430 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 KIR2DL1P43626 348 aaPredicted RBP13.31□□□□□ -0.28
CCDC57-211ENST00000578187 DHPSP49366 369 aaPredicted RBP13.31□□□□□ -0.28
CCDC57-211ENST00000578187 ZNF445P59923 1031 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 NOMO3P69849 1222 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 FMO1Q01740 532 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 CDR2Q01850 454 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 PDAP1Q13442 181 aaKnown RBP13.31□□□□□ -0.28
CCDC57-211ENST00000578187 E2F5Q15329 346 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 DAB2IPQ5VWQ8 1189 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 TMEM25Q86YD3 366 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 FMNL3Q8IVF7 1028 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 ETFBKMTQ8IXQ9 262 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 IPO4Q8TEX9 1081 aaKnown RBP13.31□□□□□ -0.28
CCDC57-211ENST00000578187 RNF139Q8WU17 664 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 BAP1Q92560 729 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 PLD4Q96BZ4 506 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 TTYH3Q9C0H2 523 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 PDCL3Q9H2J4 239 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 SMOC1Q9H4F8 434 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 ASNSD1Q9NWL6 643 aa13.31□□□□□ -0.28
CCDC57-211ENST00000578187 SFMBT1Q9UHJ3 866 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms