RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 PGFP49763 221 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 BCAT1P54687 386 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 SCAPQ12770 1279 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 MSANTD2Q6P1R3 559 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 SCUBE3Q8IX30 993 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 IGSF8Q969P0 613 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 GPR174Q9BXC1 333 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 TMEM245Q9H330 911 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 APOBEC3GQ9HC16 384 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 PCDHGA1Q9Y5H4 931 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 RAD54BQ9Y620 910 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 PI4KAP42356 2102 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 ADAMTS20P59510 1910 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 EPG5Q9HCE0 2579 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 TRIM24O15164 1050 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 TNFSF14O43557 240 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 NR2F2P24468 414 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 STILQ15468 1287 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 GEN1Q17RS7 908 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 TTC31Q49AM3 519 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 PPP1R26Q5T8A7 1209 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 FBXL13Q8NEE6 735 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 GAREM1Q9H706 876 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 SLC16A3O15427 465 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 ZBED1O96006 694 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 ATP5BP06576 529 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 NUDT1P36639 197 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 GRK6P43250 576 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 CCT8P50990 548 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 FAM193AP78312 1265 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 EFEMP1Q12805 493 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 NNTQ13423 1086 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 ZCCHC9Q8N567 271 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 TAS1R2Q8TE23 839 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 MKRN2Q9H000 416 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 ZDHHC4Q9NPG8 344 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 CNGB3Q9NQW8 809 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 ABCC13Q9NSE7 274 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 COQ4Q9Y3A0 265 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 ASCC3Q8N3C0 2202 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 SLC12A8A0AV02 714 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 KCNJ18B7U540 433 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 PMM2O15305 246 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 CD27P26842 260 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 BST2Q10589 180 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 COL9A2Q14055 689 aaPredicted RBP11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 SPOPLQ6IQ16 392 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 SERPINA13PQ6UXR4 307 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 RSRC2Q7L4I2 434 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 PIGZQ86VD9 579 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 UNC45BQ8IWX7 931 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 DEFB119Q8N690 84 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 SLC4A11Q8NBS3 891 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 HEXIM2Q96MH2 286 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 TRIM62Q9BVG3 475 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 HESX1Q9UBX0 185 aa11.74□□□□□ -0.53
SMARCE1-214ENST00000578112 TBXAS1P24557 533 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 MXI1P50539 228 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 RAD23BP54727 409 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 PPP3CAQ08209 521 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 HLA-BQ31612 363 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 ZCWPW2Q504Y3 356 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 NUGGCQ68CJ6 796 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 ZNF776Q68DI1 518 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 BEND5Q7L4P6 421 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 OXR1Q8N573 874 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 DDI1Q8WTU0 396 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 RNF139Q8WU17 664 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 BTBD1Q9H0C5 482 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 CISHQ9NSE2 258 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 RAB20Q9NX57 234 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 PLA2G4CQ9UP65 541 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 NCKAP1Q9Y2A7 1128 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 DNAH14Q0VDD8 3507 aa11.73□□□□□ -0.53
SMARCE1-214ENST00000578112 A0A1W2PQ27 194 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 A0A1W2PQ64 194 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 MDM4O15151 490 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 TSPAN3O60637 253 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 EPHX1P07099 455 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 EPB41P11171 864 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 VDRP11473 427 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 PFKFB1P16118 471 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 PRKCHP24723 683 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 HOXD9P28356 352 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 CASP1P29466 404 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 GCLMP48507 274 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 BNC1Q01954 994 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 ADGRF1Q5T601 910 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 PDZD3Q86UT5 571 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 DENND1CQ8IV53 801 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 HSCBQ8IWL3 235 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 ZC3H3Q8IXZ2 948 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 LSM14AQ8ND56 463 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 ZNF592Q92610 1267 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 LRRC4Q9HBW1 653 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 FSCN3Q9NQT6 498 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 MYO18AQ92614 2054 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 PCNX2A6NKB5 2137 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 PTPRBP23467 1997 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 TARSL2A2RTX5 802 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms