RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 RPL14P50914 215 aaKnown RBP11□□□□□ -0.65
SEC22B-201ENST00000578049 KPNA1P52294 538 aaPredicted RBP11□□□□□ -0.65
SEC22B-201ENST00000578049 GPR162Q16538 588 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 RGS21Q2M5E4 152 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 TMEM26Q6ZUK4 368 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 SNX32Q86XE0 403 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 CYP4Z2PQ8N1L4 340 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 MIER2Q8N344 545 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 SFRP1Q8N474 314 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 TMEM237Q96Q45 408 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 KCNQ5Q9NR82 932 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 C1orf232A0A0U1RR37 186 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 ETS1P14921 441 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 MTM1Q13496 603 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 BMPR2Q13873 1038 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 S100ZQ8WXG8 99 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 CDRT15Q96T59 188 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 MTMR12Q9C0I1 747 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 ACSS3Q9H6R3 686 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 C1orf167Q5SNV9 1468 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 CPS1P31327 1500 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 HMGCRP04035 888 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 TCF3P15923 654 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 NCALDP61601 193 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 VPS72Q15906 364 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 RSBN1Q5VWQ0 802 aaPredicted RBP11□□□□□ -0.65
SEC22B-201ENST00000578049 MFSD7Q6UXD7 560 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 POLNQ7Z5Q5 900 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 RDH11Q8TC12 318 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 PTCD3Q96EY7 689 aaKnown RBP11□□□□□ -0.65
SEC22B-201ENST00000578049 UBXN6Q9BZV1 441 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 CLPBQ9H078 707 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 PDGFCQ9NRA1 345 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 WDR70Q9NW82 654 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 SPASTQ9UBP0 616 aa11□□□□□ -0.65
SEC22B-201ENST00000578049 BARX2Q9UMQ3 279 aaPredicted RBP11□□□□□ -0.65
SEC22B-201ENST00000578049 SHOX2O60902 331 aaPredicted RBP10.99□□□□□ -0.65
SEC22B-201ENST00000578049 CYP1A2P05177 515 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 ABCB1P08183 1280 aaPredicted RBP10.99□□□□□ -0.65
SEC22B-201ENST00000578049 ZNF544Q6NX49 715 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 CLEC10AQ8IUN9 316 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 GINS4Q9BRT9 223 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 MUC3BQ9H195 1237 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 MOSPD1Q9UJG1 213 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 TCRBV5S4A2TA0A5A2 114 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 PSMB9P28065 219 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 EIF2B2P49770 351 aaKnown RBP10.99□□□□□ -0.65
SEC22B-201ENST00000578049 IL5RAQ01344 420 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 VAC14Q08AM6 782 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 TRAF2Q12933 501 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 ARMC3Q5W041 872 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 LRRC55Q6ZSA7 311 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 CCDC80Q76M96 950 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 SPATA20Q8TB22 786 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 APOL5Q9BWW9 433 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 TMX2Q9Y320 296 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 AK5Q9Y6K8 562 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 GYS1P13807 737 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 SSTR1P30872 391 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 IL12RB1P42701 662 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 LHX1P48742 406 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 BNIP2Q12982 314 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 RFX4Q33E94 735 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 ARHGAP17Q68EM7 881 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 FBXW8Q8N3Y1 598 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 AMER2Q8N7J2 671 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 RP9Q8TA86 221 aaKnown RBP10.99□□□□□ -0.65
SEC22B-201ENST00000578049 ZNF668Q96K58 619 aaPredicted RBP10.99□□□□□ -0.65
SEC22B-201ENST00000578049 OSBPL11Q9BXB4 747 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 PNPLA3Q9NST1 481 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 TK2O00142 265 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 WBP4O75554 376 aaKnown RBP10.99□□□□□ -0.65
SEC22B-201ENST00000578049 PROCP04070 461 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 CYP3A4P08684 503 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 ALOX15P16050 662 aaPredicted RBP10.99□□□□□ -0.65
SEC22B-201ENST00000578049 MLH1P40692 756 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 ALDH1A3P47895 512 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 NDUFA5Q16718 116 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 MAP4K3Q8IVH8 894 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 AGBL3Q8NEM8 1001 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 INTS13Q9NVM9 706 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 V9GYQ6 96 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 NWD1Q149M9 1564 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 A0A087X1B8 175 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 FAM220BPB1ANY3 271 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 FSCN2O14926 492 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 SERPINA6P08185 405 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 FAAP100Q0VG06 881 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 IKBIPQ70UQ0 350 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 KCNMB4Q86W47 210 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 BRSK2Q8IWQ3 736 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 ADHFE1Q8IWW8 467 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 KRT78Q8N1N4 520 aa10.99□□□□□ -0.65
SEC22B-201ENST00000578049 TADA2AO75478 443 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 TGFB3P10600 412 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 RARRES1P49788 294 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 RENBPP51606 427 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 BLVRAP53004 296 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 RAB15P59190 212 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 KHDRBS2Q5VWX1 349 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms