RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 BTN2A3PQ96KV6 586 aa20.35■□□□□ 0.85
SCO1-202ENST00000577335 COL4A3Q01955 1670 aa20.35■□□□□ 0.85
SCO1-202ENST00000577335 ATG13O75143 517 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 TULP3O75386 442 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 APODP05090 189 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 COL9A1P20849 921 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 CASP14P31944 242 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 C2CD6Q53TS8 623 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 FYB2Q5VWT5 728 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 ATP6V0D2Q8N8Y2 350 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 OLIG1Q8TAK6 271 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 SLC2A11Q9BYW1 496 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 TRIM5Q9C035 493 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 RBSNQ9H1K0 784 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 ARHGEF4Q9NR80 690 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 SPATA6Q9NWH7 488 aaPredicted RBP20.34■□□□□ 0.85
SCO1-202ENST00000577335 FBXO10Q9UK96 956 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 ZNF318Q5VUA4 2279 aa20.34■□□□□ 0.85
SCO1-202ENST00000577335 CHURC1-FNTBB4DL54 471 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 M0QYT0 321 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 KAT7O95251 611 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 EGFP01133 1207 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 KRT3P12035 628 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 ABCB4P21439 1286 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 TNFRSF4P43489 277 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 SLC6A11P48066 632 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 PTPN5P54829 565 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 PITX1P78337 314 aaPredicted RBP20.33■□□□□ 0.85
SCO1-202ENST00000577335 ARID5BQ14865 1188 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 TDRD12Q587J7 1177 aaKnown RBP20.33■□□□□ 0.85
SCO1-202ENST00000577335 ZC3H12AQ5D1E8 599 aaKnown RBP20.33■□□□□ 0.85
SCO1-202ENST00000577335 ACBD5Q5T8D3 534 aaPredicted RBP20.33■□□□□ 0.85
SCO1-202ENST00000577335 HGSNATQ68CP4 663 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 NAIF1Q69YI7 327 aaPredicted RBP20.33■□□□□ 0.85
SCO1-202ENST00000577335 GRAMD4Q6IC98 578 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 SND1Q7KZF4 910 aaKnown RBP eCLIP20.33■□□□□ 0.85
SCO1-202ENST00000577335 C12orf40Q86WS4 652 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 MCOLN2Q8IZK6 566 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 PHTF2Q8N3S3 785 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 ZNF557Q8N988 423 aaPredicted RBP20.33■□□□□ 0.85
SCO1-202ENST00000577335 OR8K1Q8NGG5 319 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 KCNV2Q8TDN2 545 aa20.33■□□□□ 0.85
SCO1-202ENST00000577335 TMA16Q96EY4 203 aaKnown RBP20.33■□□□□ 0.85
SCO1-202ENST00000577335 RBM12Q9NTZ6 932 aaKnown RBP20.33■□□□□ 0.85
SCO1-202ENST00000577335 DNAJC17Q9NVM6 304 aaKnown RBP20.33■□□□□ 0.85
SCO1-202ENST00000577335 SIGLEC16A6NMB1 481 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 KCNU1A8MYU2 1149 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 DDX3XO00571 662 aaKnown RBP eCLIP20.32■□□□□ 0.842e-16■■■■■ 38.9
SCO1-202ENST00000577335 LAMTOR5O43504 91 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 SKILP12757 684 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 FLT3P36888 993 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 CCR3P51677 355 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 MTAPQ13126 283 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 FAM133BQ5BKY9 247 aaKnown RBP20.32■□□□□ 0.84
SCO1-202ENST00000577335 BRMS1LQ5PSV4 323 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 NAT16Q8N8M0 369 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 DDI1Q8WTU0 396 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 RNF34Q969K3 372 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 DNAJC7Q99615 494 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 SELENOOQ9BVL4 669 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 METTL5Q9NRN9 209 aaKnown RBP20.32■□□□□ 0.84
SCO1-202ENST00000577335 FBXO4Q9UKT5 387 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 SLC27A6Q9Y2P4 619 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 KMT2EQ8IZD2 1858 aa20.32■□□□□ 0.84
SCO1-202ENST00000577335 TYW5A2RUC4 315 aaKnown RBP20.31■□□□□ 0.84
SCO1-202ENST00000577335 ANKRD62A6NC57 917 aa20.31■□□□□ 0.84
SCO1-202ENST00000577335 RTN2O75298 545 aa20.31■□□□□ 0.84
SCO1-202ENST00000577335 PAPSS2O95340 614 aaPredicted RBP20.31■□□□□ 0.84
SCO1-202ENST00000577335 PTPN9P43378 593 aa20.31■□□□□ 0.84
SCO1-202ENST00000577335 DGKGP49619 791 aa20.31■□□□□ 0.84
SCO1-202ENST00000577335 CXCR3P49682 368 aa20.31■□□□□ 0.84
SCO1-202ENST00000577335 SULT1E1P49888 294 aa20.31■□□□□ 0.84
SCO1-202ENST00000577335 MRPS21P82921 87 aaKnown RBP20.31■□□□□ 0.84
SCO1-202ENST00000577335 DEUP1Q05D60 604 aa20.31■□□□□ 0.84
SCO1-202ENST00000577335 NME3Q13232 169 aa20.31■□□□□ 0.84
SCO1-202ENST00000577335 TSR1Q2NL82 804 aaKnown RBP20.31■□□□□ 0.84
SCO1-202ENST00000577335 HSF5Q4G112 596 aaPredicted RBP20.31■□□□□ 0.84
SCO1-202ENST00000577335 PIK3R6Q5UE93 754 aa20.31■□□□□ 0.84
SCO1-202ENST00000577335 BNIPLQ7Z465 357 aa20.31■□□□□ 0.84
SCO1-202ENST00000577335 GAS2L3Q86XJ1 694 aa20.31■□□□□ 0.84
SCO1-202ENST00000577335 TERB1Q8NA31 727 aa20.31■□□□□ 0.84
SCO1-202ENST00000577335 EZH1Q92800 747 aaPredicted RBP20.31■□□□□ 0.84
SCO1-202ENST00000577335 TRIM11Q96F44 468 aa20.31■□□□□ 0.84
SCO1-202ENST00000577335 ZNHIT6Q9NWK9 470 aaKnown RBP20.31■□□□□ 0.84
SCO1-202ENST00000577335 TCRBV5S1A1TA0A578 114 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 TBC1D3BA6NDS4 549 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 C2CD4BA6NLJ0 364 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 K7EQS6 105 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 ENDOD1O94919 500 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 CISD3P0C7P0 127 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 PDGFRAP16234 1089 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 SDC4P31431 198 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 CXCL12P48061 93 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 GAS6Q14393 721 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 E2F5Q15329 346 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 ANGPT1Q15389 498 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 ZNF528Q3MIS6 628 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 OTUD1Q5VV17 481 aaPredicted RBP20.3■□□□□ 0.84
SCO1-202ENST00000577335 RNF43Q68DV7 783 aa20.3■□□□□ 0.84
SCO1-202ENST00000577335 NADSYN1Q6IA69 706 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms