RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 SEMA4DQ92854 862 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 PIWIL1Q96J94 861 aaKnown RBP10.93□□□□□ -0.66
TVP23B-208ENST00000575261 ITM2CQ9NQX7 267 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 OLA1Q9NTK5 396 aaKnown RBP10.93□□□□□ -0.66
TVP23B-208ENST00000575261 ELOVL2Q9NXB9 296 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 TSPAN16Q9UKR8 245 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 PCDHB9Q9Y5E1 797 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 MUC22E2RYF6 1773 aaPredicted RBP10.93□□□□□ -0.66
TVP23B-208ENST00000575261 A0A1W2PQ27 194 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 A0A1W2PQ64 194 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 SRRM3A6NNA2 597 aaPredicted RBP10.92□□□□□ -0.66
TVP23B-208ENST00000575261 KCNJ18B7U540 433 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 XPO1O14980 1071 aaKnown RBP10.92□□□□□ -0.66
TVP23B-208ENST00000575261 CETN3O15182 167 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 SH3BP5O60239 455 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 CER1O95813 267 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 IGLV3-19P01714 112 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 EPHX1P07099 455 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 PRKCHP24723 683 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 COPAP53621 1224 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 MCCD1P59942 119 aaPredicted RBP10.92□□□□□ -0.66
TVP23B-208ENST00000575261 ADIGQ0VDE8 80 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 TRIP4Q15650 581 aaPredicted RBP10.92□□□□□ -0.66
TVP23B-208ENST00000575261 TRIP6Q15654 476 aaKnown RBP10.92□□□□□ -0.66
TVP23B-208ENST00000575261 GOLGA7BQ2TAP0 167 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 MPPE1Q53F39 396 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 SGO2Q562F6 1265 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 DCAF17Q5H9S7 520 aaPredicted RBP10.92□□□□□ -0.66
TVP23B-208ENST00000575261 DCAF12L1Q5VU92 463 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 TCERG1LQ5VWI1 586 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 PM20D1Q6GTS8 502 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 FMNL3Q8IVF7 1028 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 SMYD4Q8IYR2 804 aaPredicted RBP10.92□□□□□ -0.66
TVP23B-208ENST00000575261 CHCHD4Q8N4Q1 142 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 EEF2KMTQ96G04 330 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 CAMK1GQ96NX5 476 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 IPO9Q96P70 1041 aaKnown RBP10.92□□□□□ -0.66
TVP23B-208ENST00000575261 NUP58Q9BVL2 599 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 ULBP1Q9BZM6 244 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 SCAND2PQ9GZW5 306 aaPredicted RBP10.92□□□□□ -0.66
TVP23B-208ENST00000575261 MIR1-1HGQ9H1L0 117 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 LRRC4Q9HBW1 653 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 HESX1Q9UBX0 185 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 CLEC4EQ9ULY5 219 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 HBS1LQ9Y450 684 aaKnown RBP10.92□□□□□ -0.66
TVP23B-208ENST00000575261 ATP6V1DQ9Y5K8 247 aa10.92□□□□□ -0.66
TVP23B-208ENST00000575261 FAM221BA6H8Z2 402 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 BCAT2O15382 392 aaPredicted RBP10.91□□□□□ -0.66
TVP23B-208ENST00000575261 SLC16A3O15427 465 aaKnown RBP10.91□□□□□ -0.66
TVP23B-208ENST00000575261 TIMM44O43615 452 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 LATS1O95835 1130 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 FTH1P19P0C7X4 201 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 HOXD9P28356 352 aaPredicted RBP10.91□□□□□ -0.66
TVP23B-208ENST00000575261 YWHAEP62258 255 aaKnown RBP10.91□□□□□ -0.66
TVP23B-208ENST00000575261 PDE4CQ08493 712 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 BST2Q10589 180 aaKnown RBP10.91□□□□□ -0.66
TVP23B-208ENST00000575261 CUL2Q13617 745 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 CBWD6Q4V339 395 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 CBWD3Q5JTY5 395 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 CBWD5Q5RIA9 395 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 TMEM215Q68D42 235 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 IL27RAQ6UWB1 636 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 BHLHA9Q7RTU4 235 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 SIX6OS1Q8N1H7 587 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 RBBP8NLQ8NC74 664 aaPredicted RBP10.91□□□□□ -0.66
TVP23B-208ENST00000575261 OR2T3Q8NH03 318 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 WFIKKN2Q8TEU8 576 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 RNF139Q8WU17 664 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 ADAMTS14Q8WXS8 1223 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 SORCS1Q8WY21 1168 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 TATDN2Q93075 761 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 PCED1AQ9H1Q7 454 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 GOLPH3LQ9H4A5 285 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 RMND1Q9NWS8 449 aa10.91□□□□□ -0.66
TVP23B-208ENST00000575261 METTL12A8MUP2 240 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 TULP2O00295 520 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 ZNF202O95125 648 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 ZNF883P0CG24 379 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 SETSIPP0DME0 302 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 CD19P15391 556 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 HLA-FP30511 346 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 MATKP42679 507 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 CAMK2GQ13555 558 aaPredicted RBP10.9□□□□□ -0.66
TVP23B-208ENST00000575261 FNDC3BQ53EP0 1204 aaKnown RBP10.9□□□□□ -0.66
TVP23B-208ENST00000575261 GLRX5Q86SX6 157 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 AHI1Q8N157 1196 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 SNX19Q92543 992 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 TSG101Q99816 390 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 LHX5Q9H2C1 402 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 GAREM1Q9H706 876 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 FBRSQ9HAH7 460 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 CNGB3Q9NQW8 809 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 ABCC13Q9NSE7 274 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 EIF2B4Q9UI10 523 aaKnown RBP10.9□□□□□ -0.66
TVP23B-208ENST00000575261 STOML2Q9UJZ1 356 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 PCOLCE2Q9UKZ9 415 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 APOBEC2Q9Y235 224 aaKnown RBP10.9□□□□□ -0.66
TVP23B-208ENST00000575261 ZDHHC9Q9Y397 364 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 COQ4Q9Y3A0 265 aa10.9□□□□□ -0.66
TVP23B-208ENST00000575261 BAHCC1Q9P281 2608 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms