RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 ARHGAP22Q7Z5H3 698 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 SDCCAG8Q86SQ7 713 aaPredicted RBP8.8□□□□□ -1
RPAIN-215ENST00000575112 ARFGAP1Q8N6T3 406 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 GPRC5AQ8NFJ5 357 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 NTPCRQ9BSD7 190 aaKnown RBP8.8□□□□□ -1
RPAIN-215ENST00000575112 MAFBQ9Y5Q3 323 aaPredicted RBP8.8□□□□□ -1
RPAIN-215ENST00000575112 WDR27A2RRH5 827 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 E7ENQ6 273 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 HNRNPRO43390 633 aaKnown RBP8.8□□□□□ -1
RPAIN-215ENST00000575112 RECQL4O94761 1208 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 TYK2P29597 1187 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 CXCR3P49682 368 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 ADIGQ0VDE8 80 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 BST1Q10588 318 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 MSLNQ13421 630 aaPredicted RBP8.8□□□□□ -1
RPAIN-215ENST00000575112 TFDP2Q14188 446 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 SLC10A6Q3KNW5 377 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 EFHC2Q5JST6 749 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 TCHHL1Q5QJ38 904 aaPredicted RBP8.8□□□□□ -1
RPAIN-215ENST00000575112 FBXL19Q6PCT2 694 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 TRMT10BQ6PF06 316 aaKnown RBP8.8□□□□□ -1
RPAIN-215ENST00000575112 KCNT2Q6UVM3 1135 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 ZNF677Q86XU0 584 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 KATNAL2Q8IYT4 538 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 ULK2Q8IYT8 1036 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 AZIN2Q96A70 460 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 SPATA16Q9BXB7 569 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 VCXQ9H320 206 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 IFT122Q9HBG6 1241 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 DDX18Q9NVP1 670 aaKnown RBP8.8□□□□□ -1
RPAIN-215ENST00000575112 RHBDL2Q9NX52 303 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 SMG5Q9UPR3 1016 aaKnown RBP8.8□□□□□ -1
RPAIN-215ENST00000575112 COQ4Q9Y3A0 265 aa8.8□□□□□ -1
RPAIN-215ENST00000575112 CNTRLQ7Z7A1 2325 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 MAGEB3O15480 346 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 DNAJC6O75061 913 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 NCAM1P13591 858 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 GOT1P17174 413 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 CDKN2BP42772 138 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 AQP5P55064 265 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 PITX1P78337 314 aaPredicted RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 CCNA1P78396 465 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 DEUP1Q05D60 604 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 CUL3Q13618 768 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 GRIK4Q16099 956 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 C1orf146Q5VVC0 180 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 PLEKHA7Q6IQ23 1121 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 TP53INP2Q8IXH6 220 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 DRAXINQ8NBI3 349 aaPredicted RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 RDM1Q8NG50 284 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 GPR152Q8TDT2 470 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 FBXO41Q8TF61 875 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 PTPRHQ9HD43 1115 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 XIRP2A4UGR9 3374 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 COL24A1Q17RW2 1714 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 IQANK1A0A1B0GTG1 560 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 TCRBV9S1A1TA0A576 114 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 BUD23O43709 281 aaKnown RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 ERVK-10P10266 1014 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 CYP2F1P24903 491 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 SERPINB6P35237 376 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 MRPS5P82675 430 aaKnown RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 BTKQ06187 659 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 FOXD4Q12950 439 aaPredicted RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 C12orf56Q8IXR9 622 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 SLC4A11Q8NBS3 891 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 BEST2Q8NFU1 509 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 ECSITQ9BQ95 431 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 SNRNP25Q9BV90 132 aaKnown RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 RHOBTB2Q9BYZ6 727 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 PHACTR1Q9C0D0 580 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 AVENQ9NQS1 362 aaPredicted RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 MAN1C1Q9NR34 630 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 PRMT7Q9NVM4 692 aaPredicted RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 DDX56Q9NY93 547 aaKnown RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 PLA2G4CQ9UP65 541 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 AHDC1Q5TGY3 1603 aaPredicted RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 MAGEA13PA6NCF6 341 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 ITM2AO43736 263 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 BNIP3LO60238 219 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 OPHN1O60890 802 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 KRT37O76014 449 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 HOXC6P09630 235 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 EPHX2P34913 555 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 CAV1Q03135 178 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 GNASQ5JWF2 1037 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 LGSNQ5TDP6 509 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 XRRA1Q6P2D8 792 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 ADGRD1Q6QNK2 874 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 TNS4Q8IZW8 715 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 DEFB106AQ8N104 65 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 MPP5Q8N3R9 675 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.79□□□□□ -1
RPAIN-215ENST00000575112 FERMT1Q9BQL6 677 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 GCOM2Q9BZD3 368 aaPredicted RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 SAR1AQ9NR31 198 aa8.79□□□□□ -1
RPAIN-215ENST00000575112 PRG3Q9Y2Y8 225 aaPredicted RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 FARP1Q9Y4F1 1045 aaPredicted RBP8.79□□□□□ -1
RPAIN-215ENST00000575112 CNTNAP2Q9UHC6 1331 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms