RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ABL2P42684 1182 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 ACSBG2Q5FVE4 666 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 GLRA4Q5JXX5 417 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 KYAT3Q6YP21 454 aaKnown RBP9.23□□□□□ -0.93
NCBP3-204ENST00000574911 DENND5BQ6ZUT9 1274 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 CATSPER4Q7RTX7 472 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 LIMS2Q7Z4I7 341 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 TREML1Q86YW5 311 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 CRLF3Q8IUI8 442 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 ARID3BQ8IVW6 561 aaPredicted RBP9.23□□□□□ -0.93
NCBP3-204ENST00000574911 C20orf27Q9GZN8 174 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 WWP1Q9H0M0 922 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 CDHR5Q9HBB8 845 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 EIF2B3Q9NR50 452 aaKnown RBP9.23□□□□□ -0.93
NCBP3-204ENST00000574911 SETD4Q9NVD3 440 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 GDAP2Q9NXN4 497 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 ARMCX1Q9P291 453 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 UBQLN1Q9UMX0 589 aaKnown RBP9.23□□□□□ -0.93
NCBP3-204ENST00000574911 HBS1LQ9Y450 684 aaKnown RBP9.23□□□□□ -0.93
NCBP3-204ENST00000574911 HES2Q9Y543 173 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 NR2E3Q9Y5X4 410 aa9.23□□□□□ -0.93
NCBP3-204ENST00000574911 SCN1AP35498 2009 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 CCDC195A0A1B0GUA6 201 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 DCAF8L1A6NGE4 600 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 LUC7L3O95232 432 aaKnown RBP9.22□□□□□ -0.93
NCBP3-204ENST00000574911 MATKP42679 507 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 RAP1GDS1P52306 607 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 CCNA1P78396 465 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 TMEM62Q0P6H9 643 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 WASHC5Q12768 1159 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 STX3Q13277 289 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 SNAPC2Q13487 334 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 BLMHQ13867 455 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 KPNB1Q14974 876 aaKnown RBP9.22□□□□□ -0.93
NCBP3-204ENST00000574911 R3HDM1Q15032 1099 aaKnown RBP9.22□□□□□ -0.93
NCBP3-204ENST00000574911 EFHC1Q5JVL4 640 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 FBXO47Q5MNV8 452 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 NOTUMQ6P988 496 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 BNIPLQ7Z465 357 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 PSTKQ8IV42 348 aaKnown RBP9.22□□□□□ -0.93
NCBP3-204ENST00000574911 HACE1Q8IYU2 909 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 UNC5BQ8IZJ1 945 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 TEX9Q8N6V9 391 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 COLGALT1Q8NBJ5 622 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 SMC1BQ8NDV3 1235 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 ACMSDQ8TDX5 336 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 CCDC106Q9BWC9 280 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 RNF19AQ9NV58 838 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 EMCNQ9ULC0 261 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 PLXNB2O15031 1838 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 RRN3P2A6NIE6 340 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 SDR42E2A6NKP2 422 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 KPNA7A9QM74 516 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 MFSD11O43934 449 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 MAGEC1O60732 1142 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 CAPN15O75808 1086 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 RECQL4O94761 1208 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 CD4P01730 458 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 ATP6V1C1P21283 382 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 ARL4AP40617 200 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 GLUD2P49448 558 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 AQP5P55064 265 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 CDC42EP1Q00587 391 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 NAB1Q13506 487 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 SLC25A52Q3SY17 297 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 DUSP28Q4G0W2 176 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 ZNF618Q5T7W0 954 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 OTUD1Q5VV17 481 aaPredicted RBP9.22□□□□□ -0.93
NCBP3-204ENST00000574911 PACS1Q6VY07 963 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 DEFB106AQ8N104 65 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 OR6J1Q8NGC5 347 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 SLC2A14Q8TDB8 520 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 ARNTL2Q8WYA1 636 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 MCUR1Q96AQ8 359 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 LGMNQ99538 433 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 SNX25Q9H3E2 840 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 NXF3Q9H4D5 531 aaKnown RBP9.22□□□□□ -0.93
NCBP3-204ENST00000574911 XPNPEP3Q9NQH7 507 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 THAP1Q9NVV9 213 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 DONSONQ9NYP3 566 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 STOML1Q9UBI4 398 aa9.22□□□□□ -0.93
NCBP3-204ENST00000574911 PPARGC1AQ9UBK2 798 aaKnown RBP9.22□□□□□ -0.93
NCBP3-204ENST00000574911 XPO1O14980 1071 aaKnown RBP9.21□□□□□ -0.93
NCBP3-204ENST00000574911 KIF1CO43896 1103 aaKnown RBP9.21□□□□□ -0.93
NCBP3-204ENST00000574911 DAB1O75553 588 aa9.21□□□□□ -0.93
NCBP3-204ENST00000574911 SMNDC1O75940 238 aaKnown RBP eCLIP9.21□□□□□ -0.93
NCBP3-204ENST00000574911 KRT36O76013 467 aa9.21□□□□□ -0.93
NCBP3-204ENST00000574911 PSMG1O95456 288 aa9.21□□□□□ -0.93
NCBP3-204ENST00000574911 TOP3BO95985 862 aaKnown RBP9.21□□□□□ -0.93
NCBP3-204ENST00000574911 ACADSP16219 412 aa9.21□□□□□ -0.93
NCBP3-204ENST00000574911 TKTP29401 623 aaKnown RBP9.21□□□□□ -0.93
NCBP3-204ENST00000574911 SULT1E1P49888 294 aa9.21□□□□□ -0.93
NCBP3-204ENST00000574911 PCBP1Q15365 356 aaKnown RBP eCLIP9.21□□□□□ -0.93
NCBP3-204ENST00000574911 DGKDQ16760 1214 aa9.21□□□□□ -0.93
NCBP3-204ENST00000574911 XKR4Q5GH76 650 aa9.21□□□□□ -0.93
NCBP3-204ENST00000574911 MBLAC2Q68D91 279 aa9.21□□□□□ -0.93
NCBP3-204ENST00000574911 FAM131BQ86XD5 332 aa9.21□□□□□ -0.93
NCBP3-204ENST00000574911 TMPRSS6Q8IU80 811 aa9.21□□□□□ -0.93
NCBP3-204ENST00000574911 CCNJLQ8IV13 435 aa9.21□□□□□ -0.93
NCBP3-204ENST00000574911 PDCD7Q8N8D1 485 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms