RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 CD6P30203 668 aa20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 ATXN3P54252 364 aaPredicted RBP20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 ZNF234Q14588 700 aa20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 CCDC40Q4G0X9 1142 aa20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 MPPE1Q53F39 396 aa20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 MSANTD2Q6P1R3 559 aa20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 TFAP2BQ92481 460 aa20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 EDEM1Q92611 657 aa20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 FOXJ1Q92949 421 aa20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 MKRN2Q9H000 416 aaKnown RBP20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 PRDM16Q9HAZ2 1276 aa20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 FSCN3Q9NQT6 498 aa20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 SFMBT1Q9UHJ3 866 aa20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 WASF3Q9UPY6 502 aa20.19■□□□□ 0.82
HCFC1R1-204ENST00000573095 P4HA2O15460 535 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 SEMA3BQ13214 749 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 STILQ15468 1287 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 TMEM215Q68D42 235 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 TTI2Q6NXR4 508 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 PIP4P1Q86T03 277 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 PPM1KQ8N3J5 372 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 LMO3Q8TAP4 145 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 SLC35F5Q8WV83 523 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 IRGQQ8WZA9 623 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 CIPCQ9C0C6 399 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 SLC32A1Q9H598 525 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 SUSD2Q9UGT4 822 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 USP24Q9UPU5 2620 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 CACNA1EQ15878 2313 aa20.18■□□□□ 0.82
HCFC1R1-204ENST00000573095 ARHGAP33O14559 1287 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 MSI1O43347 362 aaKnown RBP20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 SYNCRIPO60506 623 aaKnown RBP20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 IGLV3-27P01718 113 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 NCAM1P13591 858 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 LCP1P13796 627 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 PRKCHP24723 683 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 CETN1Q12798 172 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 FOXC1Q12948 553 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 SYCP2LQ5T4T6 812 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 ADGRF1Q5T601 910 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 HDDC3Q8N4P3 179 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 MINDY1Q8N5J2 469 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 WFIKKN2Q8TEU8 576 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 ZSWIM1Q9BR11 485 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 GTPBP2Q9BX10 602 aaKnown RBP20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 ITM2CQ9NQX7 267 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 WSB2Q9NYS7 404 aaPredicted RBP20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 NFE2L3Q9Y4A8 694 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 PCDHB4Q9Y5E5 795 aa20.17■□□□□ 0.82
HCFC1R1-204ENST00000573095 BICDL2A1A5D9 508 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 M0QYV0 167 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 TIMM44O43615 452 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 OPHN1O60890 802 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 GABBR2O75899 941 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 IGLV3-19P01714 112 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 SYPP08247 313 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 HLA-FP30511 346 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 RGS7P49802 495 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 COPAP53621 1224 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 GCNT1Q02742 428 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 CNGA2Q16280 664 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 WDR45BQ5MNZ6 344 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 ISM2Q6H9L7 571 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 KLHL10Q6JEL2 608 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 PMF1Q6P1K2 205 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 SERPINA13PQ6UXR4 307 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 TMPRSS6Q8IU80 811 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 RGL4Q8IZJ4 473 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 SORCS1Q8WY21 1168 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 KAT5Q92993 513 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 SIPA1Q96FS4 1042 aa20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 TOE1Q96GM8 510 aaKnown RBP20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 IRX2Q9BZI1 471 aaPredicted RBP20.16■□□□□ 0.82
HCFC1R1-204ENST00000573095 PCNX2A6NKB5 2137 aa20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 PPP1R3GB7ZBB8 358 aa20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 RNF225M0QZC1 329 aaPredicted RBP20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 EPHX1P07099 455 aa20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 GNSP15586 552 aa20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 BMP6P22004 513 aa20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 BRD2P25440 801 aaKnown RBP20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 TPMTP51580 245 aa20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 ARID5AQ03989 594 aa20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 CADM4Q8NFZ8 388 aa20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 NELFBQ8WX92 580 aa20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 DNASE2BQ8WZ79 361 aa20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 PRCCQ92733 491 aaPredicted RBP20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 HSFY1Q96LI6 401 aa20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 DNAAF2Q9NVR5 837 aaKnown RBP20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 CTNND2Q9UQB3 1225 aa20.15■□□□□ 0.82
HCFC1R1-204ENST00000573095 MEI4A8MW99 385 aa20.14■□□□□ 0.81
HCFC1R1-204ENST00000573095 KCNJ18B7U540 433 aa20.14■□□□□ 0.81
HCFC1R1-204ENST00000573095 TSPAN3O60637 253 aa20.14■□□□□ 0.81
HCFC1R1-204ENST00000573095 FBXO21O94952 628 aa20.14■□□□□ 0.81
HCFC1R1-204ENST00000573095 LTFP02788 710 aa20.14■□□□□ 0.81
HCFC1R1-204ENST00000573095 C7P10643 843 aa20.14■□□□□ 0.81
HCFC1R1-204ENST00000573095 OXTRP30559 389 aa20.14■□□□□ 0.81
HCFC1R1-204ENST00000573095 MARSP56192 900 aaKnown RBP20.14■□□□□ 0.81
HCFC1R1-204ENST00000573095 RING1Q06587 406 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms