RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 PLD4Q96BZ4 506 aa19.88■□□□□ 0.77
SCARF1-204ENST00000570902 UBXN6Q9BZV1 441 aa19.88■□□□□ 0.77
SCARF1-204ENST00000570902 LHX5Q9H2C1 402 aa19.88■□□□□ 0.77
SCARF1-204ENST00000570902 OSGEPQ9NPF4 335 aa19.88■□□□□ 0.77
SCARF1-204ENST00000570902 PCDHA7Q9UN72 937 aa19.88■□□□□ 0.77
SCARF1-204ENST00000570902 CKAP5Q14008 2032 aa19.88■□□□□ 0.77
SCARF1-204ENST00000570902 PTPRBP23467 1997 aa19.88■□□□□ 0.77
SCARF1-204ENST00000570902 SLC12A8A0AV02 714 aa19.87■□□□□ 0.77
SCARF1-204ENST00000570902 PDIA4P13667 645 aaKnown RBP19.87■□□□□ 0.77
SCARF1-204ENST00000570902 CSNK1EP49674 416 aaKnown RBP19.87■□□□□ 0.77
SCARF1-204ENST00000570902 SLC8A3P57103 927 aa19.87■□□□□ 0.77
SCARF1-204ENST00000570902 CAMK2GQ13555 558 aaPredicted RBP19.87■□□□□ 0.77
SCARF1-204ENST00000570902 INTS8Q75QN2 995 aaKnown RBP19.87■□□□□ 0.77
SCARF1-204ENST00000570902 FAM217AQ8IXS0 508 aa19.87■□□□□ 0.77
SCARF1-204ENST00000570902 TTC39CQ8N584 583 aa19.87■□□□□ 0.77
SCARF1-204ENST00000570902 TAS1R2Q8TE23 839 aa19.87■□□□□ 0.77
SCARF1-204ENST00000570902 PAGE5Q96GU1 130 aa19.87■□□□□ 0.77
SCARF1-204ENST00000570902 HEXIM2Q96MH2 286 aaKnown RBP19.87■□□□□ 0.77
SCARF1-204ENST00000570902 FBRSQ9HAH7 460 aa19.87■□□□□ 0.77
SCARF1-204ENST00000570902 CLEC4EQ9ULY5 219 aa19.87■□□□□ 0.77
SCARF1-204ENST00000570902 PLA2G4CQ9UP65 541 aa19.87■□□□□ 0.77
SCARF1-204ENST00000570902 SMG1Q96Q15 3661 aaKnown RBP19.87■□□□□ 0.77
SCARF1-204ENST00000570902 LOC400499M0QZD8 3231 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 TNFSF14O43557 240 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 GRIA4P48058 902 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 GCLMP48507 274 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 ZNF445P59923 1031 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 YWHAGP61981 247 aaKnown RBP eCLIP19.86■□□□□ 0.77
SCARF1-204ENST00000570902 ENPEPQ07075 957 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 PDE4CQ08493 712 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 KIF19Q2TAC6 998 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 MPPE1Q53F39 396 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 TMEM215Q68D42 235 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 WFIKKN2Q8TEU8 576 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 FAXDC2Q96IV6 333 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 C6orf106Q9H6K1 298 aaPredicted RBP19.86■□□□□ 0.77
SCARF1-204ENST00000570902 SERTAD1Q9UHV2 236 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 TRAF3IP3Q9Y228 551 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.86■□□□□ 0.77
SCARF1-204ENST00000570902 SNX11Q9Y5W9 270 aa19.86■□□□□ 0.77
SCARF1-204ENST00000570902 CELSR3Q9NYQ7 3312 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 GOLGA8CPA6NN73 597 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 MYL1P05976 194 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 C7P10643 843 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 KRT13P13646 458 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 GRK6P43250 576 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 HARS2P49590 506 aaKnown RBP19.85■□□□□ 0.77
SCARF1-204ENST00000570902 ZBTB16Q05516 673 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 INAVAQ3KP66 663 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 FNDC3BQ53EP0 1204 aaKnown RBP19.85■□□□□ 0.77
SCARF1-204ENST00000570902 ZNF394Q53GI3 561 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 RAB41Q5JT25 222 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 FOXD4L5Q5VV16 416 aaPredicted RBP19.85■□□□□ 0.77
SCARF1-204ENST00000570902 ATL3Q6DD88 541 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 FOXD4L4Q8WXT5 416 aaPredicted RBP19.85■□□□□ 0.77
SCARF1-204ENST00000570902 IGSF8Q969P0 613 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 LRIG1Q96JA1 1093 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 BTBD1Q9H0C5 482 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 TMEM245Q9H330 911 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 OLA1Q9NTK5 396 aaKnown RBP19.85■□□□□ 0.77
SCARF1-204ENST00000570902 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.85■□□□□ 0.77
SCARF1-204ENST00000570902 BTBD3Q9Y2F9 522 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 ANKRD6Q9Y2G4 727 aa19.85■□□□□ 0.77
SCARF1-204ENST00000570902 EIF4E1BA6NMX2 242 aaKnown RBP19.84■□□□□ 0.77
SCARF1-204ENST00000570902 ACTN4O43707 911 aaKnown RBP19.84■□□□□ 0.77
SCARF1-204ENST00000570902 PCDHGA12O60330 932 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 SEMA4FO95754 770 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 TRIM49P0CI25 452 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 TRIM49CP0CI26 452 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 HLA-EP13747 358 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 NR2F2P24468 414 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 HOXD9P28356 352 aaPredicted RBP19.84■□□□□ 0.77
SCARF1-204ENST00000570902 ACSL1P33121 698 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 CCT8P50990 548 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 PPP3CAQ08209 521 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 TRIP4Q15650 581 aaPredicted RBP19.84■□□□□ 0.77
SCARF1-204ENST00000570902 NFIL3Q16649 462 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 PIGZQ86VD9 579 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 TMEM176AQ96HP8 235 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 ARID3AQ99856 593 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 TMEM8AQ9HCN3 771 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 TM9SF3Q9HD45 589 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 CFAP45Q9UL16 551 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 IGSF10Q6WRI0 2623 aa19.84■□□□□ 0.77
SCARF1-204ENST00000570902 TRABD2BA6NFA1 517 aa19.83■□□□□ 0.77
SCARF1-204ENST00000570902 DNTTP04053 509 aa19.83■□□□□ 0.77
SCARF1-204ENST00000570902 HLA-FP30511 346 aa19.83■□□□□ 0.77
SCARF1-204ENST00000570902 CYP4F3Q08477 520 aa19.83■□□□□ 0.77
SCARF1-204ENST00000570902 SMAD1Q15797 465 aaKnown RBP19.83■□□□□ 0.77
SCARF1-204ENST00000570902 FOXD4L6Q3SYB3 417 aaPredicted RBP19.83■□□□□ 0.77
SCARF1-204ENST00000570902 TTC31Q49AM3 519 aaPredicted RBP19.83■□□□□ 0.77
SCARF1-204ENST00000570902 PM20D1Q6GTS8 502 aa19.83■□□□□ 0.77
SCARF1-204ENST00000570902 FOXD4L3Q6VB84 417 aaPredicted RBP19.83■□□□□ 0.77
SCARF1-204ENST00000570902 FAM186BQ8IYM0 893 aa19.83■□□□□ 0.77
SCARF1-204ENST00000570902 AHI1Q8N157 1196 aa19.83■□□□□ 0.77
SCARF1-204ENST00000570902 PDCD7Q8N8D1 485 aaKnown RBP19.83■□□□□ 0.77
SCARF1-204ENST00000570902 ANKRD52Q8NB46 1076 aa19.83■□□□□ 0.77
SCARF1-204ENST00000570902 GOLGA1Q92805 767 aa19.83■□□□□ 0.77
SCARF1-204ENST00000570902 MMRN2Q9H8L6 949 aa19.83■□□□□ 0.77
SCARF1-204ENST00000570902 USP25Q9UHP3 1055 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms