RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 NIF3L1Q9GZT8 377 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 RIMS3Q9UJD0 308 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 SERPINA10Q9UK55 444 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 CDY2AQ9Y6F7 541 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 CDY1Q9Y6F8 540 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 KLRG2A4D1S0 409 aaPredicted RBP15.87■□□□□ 0.13
SMG6-207ENST00000570756 TOP3BO95985 862 aaKnown RBP15.87■□□□□ 0.13
SMG6-207ENST00000570756 ZBED1O96006 694 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 FAM163BP0C2L3 166 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 ABCE1P61221 599 aaKnown RBP15.87■□□□□ 0.13
SMG6-207ENST00000570756 FKBP1AP62942 108 aaKnown RBP15.87■□□□□ 0.13
SMG6-207ENST00000570756 KLF10Q13118 480 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 PEX6Q13608 980 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 PCLAFQ15004 111 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 C16orf46Q6P387 395 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 TRMT10BQ6PF06 316 aaKnown RBP15.87■□□□□ 0.13
SMG6-207ENST00000570756 BIRC8Q96P09 236 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 GCOM2Q9BZD3 368 aaPredicted RBP15.87■□□□□ 0.13
SMG6-207ENST00000570756 PDLIM7Q9NR12 457 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 GABBR1Q9UBS5 961 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 EMCNQ9ULC0 261 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 PCDHGB4Q9UN71 923 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 PCDHGB5Q9Y5G0 923 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 PCDHA11Q9Y5I1 949 aa15.87■□□□□ 0.13
SMG6-207ENST00000570756 COL2A1P02458 1487 aaPredicted RBP15.87■□□□□ 0.13
SMG6-207ENST00000570756 E9PBE3 544 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 H3BSA7 217 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 ZMPSTE24O75844 475 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 THRAP10827 490 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 DPEP1P16444 411 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 EIF2AK2P19525 551 aaKnown RBP15.86■□□□□ 0.13
SMG6-207ENST00000570756 HARS2P49590 506 aaKnown RBP15.86■□□□□ 0.13
SMG6-207ENST00000570756 CDH6P55285 790 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 ZYXQ15942 572 aaKnown RBP15.86■□□□□ 0.13
SMG6-207ENST00000570756 C6orf52Q5T4I8 152 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 LRRC8BQ6P9F7 803 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 BBS5Q8N3I7 341 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 SNRNP27Q8WVK2 155 aaKnown RBP15.86■□□□□ 0.13
SMG6-207ENST00000570756 XPNPEP1Q9NQW7 623 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 FBXO28Q9NVF7 368 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 ASNSD1Q9NWL6 643 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 H0YIN7 160 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 ZNF195O14628 629 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 MED7O43513 233 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 TRPA1O75762 1119 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 PIGRP01833 764 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 MYCLP12524 364 aaPredicted RBP15.86■□□□□ 0.13
SMG6-207ENST00000570756 ZNF23P17027 643 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 PSMC3P17980 439 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 CDK9P50750 372 aaKnown RBP15.86■□□□□ 0.13
SMG6-207ENST00000570756 MRPS22P82650 360 aaKnown RBP15.86■□□□□ 0.13
SMG6-207ENST00000570756 GHRHRQ02643 423 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 TAF5Q15542 800 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 FAXCQ5TGI0 409 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 BNC2Q6ZN30 1099 aaPredicted RBP15.86■□□□□ 0.13
SMG6-207ENST00000570756 CYS1Q717R9 158 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 C10orf107Q8IVU9 208 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 EMC1Q8N766 993 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 TRIML2Q8N7C3 387 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 SLC4A11Q8NBS3 891 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 CLEC4DQ8WXI8 215 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 TFAP2BQ92481 460 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 LHX5Q9H2C1 402 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 FAIMQ9NVQ4 179 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 VPS28Q9UK41 221 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 CNOT11Q9UKZ1 510 aaKnown RBP15.86■□□□□ 0.13
SMG6-207ENST00000570756 SQORQ9Y6N5 450 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 CNTNAP2Q9UHC6 1331 aa15.86■□□□□ 0.13
SMG6-207ENST00000570756 SPDYE16A6NNV3 312 aaPredicted RBP15.85■□□□□ 0.13
SMG6-207ENST00000570756 RALBP11234 206 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 MAGEA3P43357 314 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 CD97P48960 835 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 NUDT2P50583 147 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 MMRN1Q13201 1228 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 PGM5Q15124 567 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 INSCQ1MX18 579 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 SLC44A4Q53GD3 710 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 VWA5B1Q5TIE3 1220 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 STRIP1Q5VSL9 837 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 SMYD5Q6GMV2 418 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 DENND1BQ6P3S1 775 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 SMYD1Q8NB12 490 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 KYQ8NBH2 561 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 TSPAN14Q8NG11 270 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 SYTL5Q8TDW5 730 aaPredicted RBP15.85■□□□□ 0.13
SMG6-207ENST00000570756 TRPC4APQ8TEL6 797 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 NLRP7Q8WX94 980 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 MASTLQ96GX5 879 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 SIGLEC10Q96LC7 697 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 CCT7Q99832 543 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 INO80BQ9C086 356 aaPredicted RBP15.85■□□□□ 0.13
SMG6-207ENST00000570756 COPS7BQ9H9Q2 264 aaPredicted RBP15.85■□□□□ 0.13
SMG6-207ENST00000570756 PCDH18Q9HCL0 1135 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.85■□□□□ 0.13
SMG6-207ENST00000570756 MAP3K20Q9NYL2 800 aaKnown RBP15.85■□□□□ 0.13
SMG6-207ENST00000570756 SEPT9Q9UHD8 586 aaPredicted RBP15.85■□□□□ 0.13
SMG6-207ENST00000570756 ENDOD1O94919 500 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 MX2P20592 715 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 GK3PQ14409 553 aa15.85■□□□□ 0.13
SMG6-207ENST00000570756 ZBTB41Q5SVQ8 909 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms