RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 BHLHA9Q7RTU4 235 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 RABEPKQ7Z6M1 372 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 ARHGAP18Q8N392 663 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZNF276Q8N554 614 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 RNF139Q8WU17 664 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 SNX19Q92543 992 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 PRCCQ92733 491 aaPredicted RBP9□□□□□ -0.97
CTDNEP1-203ENST00000570385 FOXJ1Q92949 421 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 IPO9Q96P70 1041 aaKnown RBP9□□□□□ -0.97
CTDNEP1-203ENST00000570385 FAM124BQ9H5Z6 455 aaPredicted RBP9□□□□□ -0.97
CTDNEP1-203ENST00000570385 IL21RQ9HBE5 538 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 DNAAF2Q9NVR5 837 aaKnown RBP9□□□□□ -0.97
CTDNEP1-203ENST00000570385 USP36Q9P275 1121 aaKnown RBP9□□□□□ -0.97
CTDNEP1-203ENST00000570385 EIF2B4Q9UI10 523 aaKnown RBP9□□□□□ -0.97
CTDNEP1-203ENST00000570385 NEUROG3Q9Y4Z2 214 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 PCDHB9Q9Y5E1 797 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 SLCO1B1Q9Y6L6 691 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 APC2O95996 2303 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZFHX4Q86UP3 3567 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 ASXL3Q9C0F0 2248 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 KNTC1P50748 2209 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 GOLGA6L7A0A1B0GV03 622 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 A0A1W2PQ27 194 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 A0A1W2PQ64 194 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 TRIM49BA6NDI0 452 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 YJEFN3A6XGL0 299 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 UPK3BL1B0FP48 263 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 UPK3BL2E5RIL1 263 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 E7ENQ6 273 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 KCNK3O14649 394 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 XPO1O14980 1071 aaKnown RBP8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 STX10O60499 249 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 GJB3O75712 270 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 ACADMP11310 421 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 HOXB3P14651 431 aaPredicted RBP8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 HOXD9P28356 352 aaPredicted RBP8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 HLA-FP30511 346 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 HARS2P49590 506 aaKnown RBP8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 SGSHP51688 502 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 COPAP53621 1224 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 ENPEPQ07075 957 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 ENPP2Q13822 863 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 TRIP4Q15650 581 aaPredicted RBP8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 EDRF1Q3B7T1 1238 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 FNDC3BQ53EP0 1204 aaKnown RBP8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 MPPE1Q53F39 396 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 SGO2Q562F6 1265 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 ANKRD40Q6AI12 368 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 PM20D1Q6GTS8 502 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 RFWD3Q6PCD5 774 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 LAYNQ6UX15 382 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 CHST9Q7L1S5 443 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 NAXDQ8IW45 347 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 SIX6OS1Q8N1H7 587 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 CPXM2Q8N436 756 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 TTC39CQ8N584 583 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 RBBP8NLQ8NC74 664 aaPredicted RBP8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 SETD7Q8WTS6 366 aaKnown RBP8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 DNASE2BQ8WZ79 361 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 TFAP2BQ92481 460 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 PLD4Q96BZ4 506 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 TMA16Q96EY4 203 aaKnown RBP8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 UBXN6Q9BZV1 441 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 SCAND2PQ9GZW5 306 aaPredicted RBP8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 MTG2Q9H4K7 406 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 ABCB8Q9NUT2 735 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 HESX1Q9UBX0 185 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 SUSD2Q9UGT4 822 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 MSRB2Q9Y3D2 182 aa8.99□□□□□ -0.97
CTDNEP1-203ENST00000570385 CKAP5Q14008 2032 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 FASNP49327 2511 aaKnown RBP8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 A0A1B0GTW7 788 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 A0A1B0GVT2 93 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 GOLGA8CPA6NN73 597 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 METTL12A8MUP2 240 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 O00370 1275 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 BCAT2O15382 392 aaPredicted RBP8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 GABBR2O75899 941 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 FTH1P19P0C7X4 201 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 OXTRP30559 389 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 ACSL1P33121 698 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 RDXP35241 583 aaKnown RBP8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 CSNK1EP49674 416 aaKnown RBP8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 NUMBP49757 651 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 BCAT1P54687 386 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 BNC1Q01954 994 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 BST2Q10589 180 aaKnown RBP8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 TMEM270Q6UE05 265 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 METTL3Q86U44 580 aaKnown RBP8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 SLCO6A1Q86UG4 719 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 ADIPOR2Q86V24 386 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 MARCH9Q86YJ5 346 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZC3H3Q8IXZ2 948 aaKnown RBP8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 OR2T3Q8NH03 318 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 WFDC5Q8TCV5 224 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 KAT5Q92993 513 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 TSG101Q99816 390 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 NUP58Q9BVL2 599 aa8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 C6orf106Q9H6K1 298 aaPredicted RBP8.98□□□□□ -0.97
CTDNEP1-203ENST00000570385 GAREM1Q9H706 876 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms