RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ARHGAP17Q68EM7 881 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 SERPINA13PQ6UXR4 307 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 KRBA2Q6ZNG9 492 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 BHLHA9Q7RTU4 235 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 METTL3Q86U44 580 aaKnown RBP16.24■□□□□ 0.19
NME3-211ENST00000568561 ARHGAP18Q8N392 663 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 CPXM2Q8N436 756 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 FBXL13Q8NEE6 735 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 DNASE2BQ8WZ79 361 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 EDEM1Q92611 657 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 PRCCQ92733 491 aaPredicted RBP16.24■□□□□ 0.19
NME3-211ENST00000568561 EIF2B4Q9UI10 523 aaKnown RBP16.24■□□□□ 0.19
NME3-211ENST00000568561 ZDHHC9Q9Y397 364 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 PCDHB9Q9Y5E1 797 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 CABIN1Q9Y6J0 2220 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 ACACAQ13085 2346 aa16.24■□□□□ 0.19
NME3-211ENST00000568561 FAM237AA0A1B0GTK4 181 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 TAF4O00268 1085 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 MSI1O43347 362 aaKnown RBP16.23■□□□□ 0.19
NME3-211ENST00000568561 ZBED1O96006 694 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 HOXD9P28356 352 aaPredicted RBP16.23■□□□□ 0.19
NME3-211ENST00000568561 GTF2H1P32780 548 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 RDXP35241 583 aaKnown RBP16.23■□□□□ 0.19
NME3-211ENST00000568561 RING1Q06587 406 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 PDE4CQ08493 712 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 ADIGQ0VDE8 80 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 SLC14A1Q13336 389 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 DCAF17Q5H9S7 520 aaPredicted RBP16.23■□□□□ 0.19
NME3-211ENST00000568561 FMNL3Q8IVF7 1028 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 FAM217AQ8IXS0 508 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 ANKRD52Q8NB46 1076 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 SETD7Q8WTS6 366 aaKnown RBP16.23■□□□□ 0.19
NME3-211ENST00000568561 CYB5D2Q8WUJ1 264 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 SNX19Q92543 992 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 PLD4Q96BZ4 506 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 GAREM1Q9H706 876 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 RAB20Q9NX57 234 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 SFMBT1Q9UHJ3 866 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 TSPAN16Q9UKR8 245 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 LHX6Q9UPM6 363 aa16.23■□□□□ 0.19
NME3-211ENST00000568561 FNDC3AQ9Y2H6 1198 aaKnown RBP16.23■□□□□ 0.19
NME3-211ENST00000568561 METTL12A8MUP2 240 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 NPC1O15118 1278 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 BCAT2O15382 392 aaPredicted RBP16.22■□□□□ 0.19
NME3-211ENST00000568561 ACADMP11310 421 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 CD19P15391 556 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 HLA-FP30511 346 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 SGSHP51688 502 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 ARID5AQ03989 594 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 ENPEPQ07075 957 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 COL9A2Q14055 689 aaPredicted RBP16.22■□□□□ 0.19
NME3-211ENST00000568561 HNRNPDQ14103 355 aaKnown RBP16.22■□□□□ 0.19
NME3-211ENST00000568561 EIF4HQ15056 248 aaKnown RBP16.22■□□□□ 0.19
NME3-211ENST00000568561 CBWD6Q4V339 395 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 FNDC3BQ53EP0 1204 aaKnown RBP16.22■□□□□ 0.19
NME3-211ENST00000568561 CBWD3Q5JTY5 395 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 CBWD5Q5RIA9 395 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 TCERG1LQ5VWI1 586 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 CADM4Q8NFZ8 388 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 UBA3Q8TBC4 463 aa16.22■□□□□ 0.19
NME3-211ENST00000568561 C6orf106Q9H6K1 298 aaPredicted RBP16.22■□□□□ 0.19
NME3-211ENST00000568561 ADAMTS20P59510 1910 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 CELSR3Q9NYQ7 3312 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 PLXNA2O75051 1894 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 A0A1B0GVT2 93 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 FAM221BA6H8Z2 402 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 YJEFN3A6XGL0 299 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 E7ENQ6 273 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 CBFA2T3O75081 653 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 IGLV3-19P01714 112 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 EPB41P11171 864 aaKnown RBP16.21■□□□□ 0.19
NME3-211ENST00000568561 OXTRP30559 389 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 ZNF132P52740 706 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 SLC8A3P57103 927 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 SCAPQ12770 1279 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 TRIP4Q15650 581 aaPredicted RBP16.21■□□□□ 0.19
NME3-211ENST00000568561 EDRF1Q3B7T1 1238 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 PM20D1Q6GTS8 502 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 LAYNQ6UX15 382 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 SLCO6A1Q86UG4 719 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 ZC3H3Q8IXZ2 948 aaKnown RBP16.21■□□□□ 0.19
NME3-211ENST00000568561 TTC39CQ8N584 583 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 ADAMTS14Q8WXS8 1223 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 SLC2A11Q9BYW1 496 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 UBXN6Q9BZV1 441 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 ZDHHC5Q9C0B5 715 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 LRRC4Q9HBW1 653 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 GDPD2Q9HCC8 539 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 PCOLCE2Q9UKZ9 415 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 IGSF10Q6WRI0 2623 aa16.21■□□□□ 0.19
NME3-211ENST00000568561 GOLGA4Q13439 2230 aaKnown RBP16.21■□□□□ 0.18
NME3-211ENST00000568561 NYNRINQ9P2P1 1898 aaKnown RBP16.2■□□□□ 0.18
NME3-211ENST00000568561 PIK3R2O00459 728 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 XPO1O14980 1071 aaKnown RBP16.2■□□□□ 0.18
NME3-211ENST00000568561 CAPNS1P04632 268 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 ACSL1P33121 698 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 MATKP42679 507 aa16.2■□□□□ 0.18
NME3-211ENST00000568561 HARS2P49590 506 aaKnown RBP16.2■□□□□ 0.18
NME3-211ENST00000568561 CSNK1EP49674 416 aaKnown RBP16.2■□□□□ 0.18
NME3-211ENST00000568561 BCAT1P54687 386 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms