RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLK3-223ENST00000568488 RASAL2Q9UJF2 1139 aa16.99■□□□□ 0.31
CLK3-223ENST00000568488 NAGPAQ9UK23 515 aa16.99■□□□□ 0.31
CLK3-223ENST00000568488 PLA2G4CQ9UP65 541 aa16.99■□□□□ 0.31
CLK3-223ENST00000568488 MYLKQ15746 1914 aa16.99■□□□□ 0.31
CLK3-223ENST00000568488 STAU1O95793 577 aaKnown RBP16.98■□□□□ 0.31
CLK3-223ENST00000568488 BMP15O95972 392 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 KRT10P13645 584 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 ADORA2BP29275 332 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 CORO1AP31146 461 aaKnown RBP16.98■□□□□ 0.31
CLK3-223ENST00000568488 ATICP31939 592 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 SHBQ15464 509 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 PKDCCQ504Y2 493 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 KLHDC10Q6PID8 442 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 KDM7AQ6ZMT4 941 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 TSC1Q92574 1164 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 ZNF516Q92618 1163 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 ELMO3Q96BJ8 720 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 HNRNPABQ99729 332 aaKnown RBP16.98■□□□□ 0.31
CLK3-223ENST00000568488 CSNK1G1Q9HCP0 422 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 AASDHPPTQ9NRN7 309 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 FAM49BQ9NUQ9 324 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 NCKAP1Q9Y2A7 1128 aa16.98■□□□□ 0.31
CLK3-223ENST00000568488 COL6A6A6NMZ7 2263 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 IGHV4-34P06331 123 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 UCNP55089 124 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 COG7P83436 770 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 BNIP3Q12983 259 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 TTC31Q49AM3 519 aaPredicted RBP16.97■□□□□ 0.31
CLK3-223ENST00000568488 STXBP4Q6ZWJ1 553 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 TADA2BQ86TJ2 420 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 DENND1CQ8IV53 801 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 C12orf29Q8N999 325 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 RBBP8NLQ8NC74 664 aaPredicted RBP16.97■□□□□ 0.31
CLK3-223ENST00000568488 HPS3Q969F9 1004 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 PANK2Q9BZ23 570 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 DCLK3Q9C098 648 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 XYLT2Q9H1B5 865 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 GDF3Q9NR23 364 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 AGO1Q9UL18 857 aaKnown RBP16.97■□□□□ 0.31
CLK3-223ENST00000568488 COL5A1P20908 1838 aaPredicted RBP16.97■□□□□ 0.31
CLK3-223ENST00000568488 CKAP5Q14008 2032 aa16.97■□□□□ 0.31
CLK3-223ENST00000568488 A0A1W2PPC4 97 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 WNT1P04628 370 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 FAM200BP0CF97 657 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 RALAP11233 206 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 CKMT2P17540 419 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 ARRB1P49407 418 aaPredicted RBP16.96■□□□□ 0.31
CLK3-223ENST00000568488 CYP2J2P51589 502 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 PCBP4P57723 403 aaKnown RBP16.96■□□□□ 0.31
CLK3-223ENST00000568488 INSM1Q01101 510 aaPredicted RBP16.96■□□□□ 0.31
CLK3-223ENST00000568488 ZBTB16Q05516 673 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 CYP24A1Q07973 514 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 EFEMP1Q12805 493 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 ILKQ13418 452 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 BIRC3Q13489 604 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 PSMD6Q15008 389 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 ZNF699Q32M78 642 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 ZNF667Q5HYK9 610 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 SLC2A11Q9BYW1 496 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 SDCBP2Q9H190 292 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 TMEM245Q9H330 911 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 PRSS16Q9NQE7 514 aa16.96■□□□□ 0.31
CLK3-223ENST00000568488 SPTA1P02549 2419 aa16.95■□□□□ 0.3
CLK3-223ENST00000568488 FRMD3A2A2Y4 597 aa16.95■□□□□ 0.3
CLK3-223ENST00000568488 CLIC2O15247 247 aa16.95■□□□□ 0.3
CLK3-223ENST00000568488 YKT6O15498 198 aa16.95■□□□□ 0.3
CLK3-223ENST00000568488 KLK10O43240 276 aa16.95■□□□□ 0.3
CLK3-223ENST00000568488 KIF20AO95235 890 aa16.95■□□□□ 0.3
CLK3-223ENST00000568488 CD38P28907 300 aa16.95■□□□□ 0.3
CLK3-223ENST00000568488 EPHA8P29322 1005 aaPredicted RBP16.95■□□□□ 0.3
CLK3-223ENST00000568488 TXLNAP40222 546 aa16.95■□□□□ 0.3
CLK3-223ENST00000568488 CHST9Q7L1S5 443 aa16.95■□□□□ 0.3
CLK3-223ENST00000568488 PRICKLE2Q7Z3G6 844 aa16.95■□□□□ 0.3
CLK3-223ENST00000568488 CCDC65Q8IXS2 484 aa16.95■□□□□ 0.3
CLK3-223ENST00000568488 EBF2Q9HAK2 575 aa16.95■□□□□ 0.3
CLK3-223ENST00000568488 MT-CO3P00414 261 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 GJB2P29033 226 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 NDST1P52848 882 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 GALCP54803 685 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 ZNF776Q68DI1 518 aaPredicted RBP16.94■□□□□ 0.3
CLK3-223ENST00000568488 CLEC20AQ6ZU45 233 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 SCD5Q86SK9 330 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 DHX40Q8IX18 779 aaKnown RBP16.94■□□□□ 0.3
CLK3-223ENST00000568488 CACTIN-AS1Q8N1I8 211 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 DCBLD1Q8N8Z6 715 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 KCNE4Q8WWG9 221 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 MED8Q96G25 268 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 ZNF578Q96N58 590 aaPredicted RBP16.94■□□□□ 0.3
CLK3-223ENST00000568488 FBRSQ9HAH7 460 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 FBXL12Q9NXK8 326 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 ADAMTS1Q9UHI8 967 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 PCDHB1Q9Y5F3 818 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 PCDHA5Q9Y5H7 936 aa16.94■□□□□ 0.3
CLK3-223ENST00000568488 HHLA1C9JL84 531 aa16.93■□□□□ 0.3
CLK3-223ENST00000568488 WNT9AO14904 365 aa16.93■□□□□ 0.3
CLK3-223ENST00000568488 EIF5BO60841 1220 aaKnown RBP16.93■□□□□ 0.3
CLK3-223ENST00000568488 MPOP05164 745 aa16.93■□□□□ 0.3
CLK3-223ENST00000568488 HLA-FP30511 346 aa16.93■□□□□ 0.3
CLK3-223ENST00000568488 HOXD13P35453 343 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms