RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ZNF568Q3ZCX4 644 aa11.21□□□□□ -0.62
PALB2-206ENST00000568219 GLRA4Q5JXX5 417 aa11.21□□□□□ -0.62
PALB2-206ENST00000568219 GCOM2Q9BZD3 368 aaPredicted RBP11.21□□□□□ -0.62
PALB2-206ENST00000568219 PLGRKTQ9HBL7 147 aa11.21□□□□□ -0.62
PALB2-206ENST00000568219 DCDC2Q9UHG0 476 aa11.21□□□□□ -0.62
PALB2-206ENST00000568219 ATP11BQ9Y2G3 1177 aa11.21□□□□□ -0.62
PALB2-206ENST00000568219 AP4S1Q9Y587 144 aa11.21□□□□□ -0.62
PALB2-206ENST00000568219 MYPNQ86TC9 1320 aa11.21□□□□□ -0.62
PALB2-206ENST00000568219 J3QRK9 145 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 APOC4-APOC2K7ER74 178 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 APOC2P02655 101 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 IL10P22301 178 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 HMOX2P30519 316 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 ABCE1P61221 599 aaKnown RBP11.2□□□□□ -0.62
PALB2-206ENST00000568219 RALGDSQ12967 914 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 BFSP2Q13515 415 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 PPM1LQ5SGD2 360 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 PARP8Q8N3A8 854 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 RNF149Q8NC42 400 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 FBXL8Q96CD0 374 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 MTG1Q9BT17 334 aaPredicted RBP11.2□□□□□ -0.62
PALB2-206ENST00000568219 NIF3L1Q9GZT8 377 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 POLR1BQ9H9Y6 1135 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 TJP2Q9UDY2 1190 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 DAPK2Q9UIK4 370 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 RICTORQ6R327 1708 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 A0A088AWK7 358 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 PDGFRBP09619 1106 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 CSH1P0DML2 217 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 CSH2P0DML3 217 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 CCDC130P13994 396 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 TPH1P17752 444 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 NME3Q13232 169 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 CTC1Q2NKJ3 1217 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 ZBTB41Q5SVQ8 909 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 TMEM198Q66K66 360 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 C7orf26Q96N11 449 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 CAB39LQ9H9S4 337 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 KCNK13Q9HB14 408 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 FAM149AA5PLN7 773 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 ZNF839A8K0R7 811 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 OATP04181 439 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 LCP1P13796 627 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 CKMT2P17540 419 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 XRCC1P18887 633 aaPredicted RBP11.2□□□□□ -0.62
PALB2-206ENST00000568219 HSPA13P48723 471 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 PLK1P53350 603 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 MAP3K10Q02779 954 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 ITKQ08881 620 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 FUT11Q495W5 492 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 UNC5AQ6ZN44 842 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 CDKL3Q8IVW4 592 aaPredicted RBP11.2□□□□□ -0.62
PALB2-206ENST00000568219 OR6B3Q8NGW1 331 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 ATP6V1E2Q96A05 226 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 SDCCAG3Q96C92 435 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 BEGAINQ9BUH8 593 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 SPC25Q9HBM1 224 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 PKD2L2Q9NZM6 624 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 TRIM17Q9Y577 477 aa11.2□□□□□ -0.62
PALB2-206ENST00000568219 PHGDHO43175 533 aaKnown RBP11.19□□□□□ -0.62
PALB2-206ENST00000568219 PIGNO95427 931 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 POLBP06746 335 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 MMP8P22894 467 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 SPRP35270 261 aaPredicted RBP11.19□□□□□ -0.62
PALB2-206ENST00000568219 GRIA1P42261 906 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 NUMBP49757 651 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 KLF1Q13351 362 aaPredicted RBP11.19□□□□□ -0.62
PALB2-206ENST00000568219 ADRM1Q16186 407 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 KLHL35Q6PF15 583 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 BBS12Q6ZW61 710 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 CHSY1Q86X52 802 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 NCAPG2Q86XI2 1143 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 CERS5Q8N5B7 392 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 NKD2Q969F2 451 aaPredicted RBP11.19□□□□□ -0.62
PALB2-206ENST00000568219 VCPIP1Q96JH7 1222 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 OMDQ99983 421 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 SYT11Q9BT88 431 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 RPF1Q9H9Y2 349 aaKnown RBP11.19□□□□□ -0.62
PALB2-206ENST00000568219 ZNRF3Q9ULT6 936 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 POLIQ9UNA4 740 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 A0A096LPK6 155 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 SDR42E2A6NKP2 422 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 KCNK1O00180 336 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 ZC3H11AO75152 810 aaKnown RBP eCLIP11.19□□□□□ -0.62
PALB2-206ENST00000568219 ZBTB11O95625 1053 aaPredicted RBP11.19□□□□□ -0.62
PALB2-206ENST00000568219 CST3P01034 146 aaPredicted RBP11.19□□□□□ -0.62
PALB2-206ENST00000568219 NR1D2Q14995 579 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 FAM47CQ5HY64 1035 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 C6orf183Q5T699 404 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 ARMCX6Q7L4S7 300 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 DSELQ8IZU8 1212 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 USP33Q8TEY7 942 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 TMIGD2Q96BF3 282 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 VPS50Q96JG6 964 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 PCDHAC1Q9H158 963 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 TIMMDC1Q9NPL8 285 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 XPNPEP3Q9NQH7 507 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 DDX28Q9NUL7 540 aaKnown RBP11.19□□□□□ -0.62
PALB2-206ENST00000568219 NENFQ9UMX5 172 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 ANKRD12Q6UB98 2062 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms