RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 SNX10Q9Y5X0 201 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 BCLAF3A2AJT9 711 aaKnown RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 WDR27A2RRH5 827 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 H0YGN5 161 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 RTN3O95197 1032 aaPredicted RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 EFEMP2O95967 443 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 HAPLN1P10915 354 aaPredicted RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 STIP1P31948 543 aaKnown RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 OR1D2P34982 312 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 NR2C2P49116 596 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 DUSP4Q13115 394 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 SEMA3BQ13214 749 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 DPYSQ14117 519 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 MORF4L2Q15014 288 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 SLC45A4Q5BKX6 768 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 CMTR2Q8IYT2 770 aaKnown RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 RNF168Q8IYW5 571 aaPredicted RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 ARHGAP18Q8N392 663 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 ZCCHC9Q8N567 271 aaKnown RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 COLGALT1Q8NBJ5 622 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 ARL8AQ96BM9 186 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 TMEM169Q96HH4 297 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 QKIQ96PU8 341 aaKnown RBP eCLIP12.14□□□□□ -0.47
BBS4-213ENST00000567279 EPAS1Q99814 870 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 OSER1Q9NX31 292 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 DTLQ9NZJ0 730 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 SHOC2Q9UQ13 582 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 NFS1Q9Y697 457 aa12.14□□□□□ -0.47
BBS4-213ENST00000567279 MRPL42Q9Y6G3 142 aaKnown RBP12.14□□□□□ -0.47
BBS4-213ENST00000567279 ALPK3Q96L96 1907 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 GOLGA6L10A6NI86 522 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 ZBBXA8MT70 800 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 RIPK2O43353 540 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 SOD2P04179 222 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 LAG3P18627 525 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 YWHAQP27348 245 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 ACTN2P35609 894 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 GYS2P54840 703 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 RPL10AP62906 217 aaKnown RBP12.13□□□□□ -0.47
BBS4-213ENST00000567279 BASP1P80723 227 aaKnown RBP12.13□□□□□ -0.47
BBS4-213ENST00000567279 ZNF844Q08AG5 666 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 XRCC4Q13426 336 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 TTMPQ5BVD1 217 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 FAM182AQ5T1J6 154 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 TRMT10CQ7L0Y3 403 aaKnown RBP12.13□□□□□ -0.47
BBS4-213ENST00000567279 OTOP2Q7RTS6 562 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 PCGF5Q86SE9 256 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 MON1AQ86VX9 555 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 PPIL6Q8IXY8 311 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 SLC39A11Q8N1S5 342 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 NETO2Q8NC67 525 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 UHMK1Q8TAS1 419 aaKnown RBP12.13□□□□□ -0.47
BBS4-213ENST00000567279 GIPC2Q8TF65 315 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 HERC2P3Q9BVR0 1158 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 FOXP3Q9BZS1 431 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 PRDM16Q9HAZ2 1276 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 USP29Q9HBJ7 922 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 IL23AQ9NPF7 189 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 BACE2Q9Y5Z0 518 aa12.13□□□□□ -0.47
BBS4-213ENST00000567279 DCLK1O15075 740 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 BAIAP3O94812 1187 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 GLUD2P49448 558 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 KRT71Q3SY84 523 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 BRMS1LQ5PSV4 323 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 ANKRD22Q5VYY1 191 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 SLC8B1Q6J4K2 584 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 CEP128Q6ZU80 1094 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 CPT1BQ92523 772 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 PRCCQ92733 491 aaPredicted RBP12.12□□□□□ -0.47
BBS4-213ENST00000567279 SPATA17Q96L03 361 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 SERPINB11Q96P15 392 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 OLFM3Q96PB7 478 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 RBM15Q96T37 977 aaKnown RBP eCLIP12.12□□□□□ -0.47
BBS4-213ENST00000567279 YME1L1Q96TA2 773 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 CENPHQ9H3R5 247 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 IL37Q9NZH6 218 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 PAK5Q9P286 719 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
BBS4-213ENST00000567279 GOLGA6CA6NDK9 693 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 GOLGA8MH3BSY2 632 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 ACSL3O95573 720 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 MOCS2O96007 188 aaPredicted RBP12.12□□□□□ -0.47
BBS4-213ENST00000567279 SHBGP04278 402 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 NUDT17P0C025 328 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 MYZAPP0CAP1 466 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 GOLGA6DP0CG33 693 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 ERCC2P18074 760 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 ATF6P18850 670 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 CCR1P32246 355 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 EIF3BP55884 814 aaKnown RBP12.12□□□□□ -0.47
BBS4-213ENST00000567279 TAF10Q12962 218 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 SLC29A2Q14542 456 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 PAFAH1B3Q15102 231 aaKnown RBP12.12□□□□□ -0.47
BBS4-213ENST00000567279 HEATR6Q6AI08 1181 aaKnown RBP12.12□□□□□ -0.47
BBS4-213ENST00000567279 MSANTD2Q6P1R3 559 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 BZW1Q7L1Q6 419 aaKnown RBP12.12□□□□□ -0.47
BBS4-213ENST00000567279 HOOK3Q86VS8 718 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 TFB1MQ8WVM0 346 aaKnown RBP12.12□□□□□ -0.47
BBS4-213ENST00000567279 RTP4Q96DX8 246 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 SIK2Q9H0K1 926 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms