RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 PCDHB4Q9Y5E5 795 aa10.86□□□□□ -0.67
LINC00564-201ENST00000567258 SLC12A8A0AV02 714 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 BCLAF3A2AJT9 711 aaKnown RBP10.85□□□□□ -0.67
LINC00564-201ENST00000567258 BIN1O00499 593 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 KHNYNO15037 678 aaKnown RBP10.85□□□□□ -0.67
LINC00564-201ENST00000567258 P4HA2O15460 535 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 PAEPP09466 180 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 CORO1AP31146 461 aaKnown RBP10.85□□□□□ -0.67
LINC00564-201ENST00000567258 LIMK1P53667 647 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 PDE4CQ08493 712 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 PAK1Q13153 545 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 STILQ15468 1287 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 PPM1JQ5JR12 505 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 RAB41Q5JT25 222 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 PMS2CLQ68D20 193 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 RNF43Q68DV7 783 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 SCD5Q86SK9 330 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 CREBRFQ8IUR6 639 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 DENND1CQ8IV53 801 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 SFTPA1Q8IWL2 248 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 DDI1Q8WTU0 396 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 WBP2Q969T9 261 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 PLD4Q96BZ4 506 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 ZDHHC4Q9NPG8 344 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 PLK2Q9NYY3 685 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 MARK1Q9P0L2 795 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC00564-201ENST00000567258 GON4LQ3T8J9 2241 aa10.85□□□□□ -0.67
LINC00564-201ENST00000567258 TNRC6BQ9UPQ9 1833 aaKnown RBP10.84□□□□□ -0.67
LINC00564-201ENST00000567258 ADAMTS9Q9P2N4 1935 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 PMM2O15305 246 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 AP5Z1O43299 807 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 ZNF217O75362 1048 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 LCP1P13796 627 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 P2RY2P41231 377 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 WASP42768 502 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 ADIGQ0VDE8 80 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 MESP2Q0VG99 397 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 STARD3Q14849 445 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 STPG1Q5TH74 334 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 DAB2IPQ5VWQ8 1189 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 PM20D1Q6GTS8 502 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 SLC36A4Q6YBV0 504 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 PHTF2Q8N3S3 785 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 PRR7Q8TB68 274 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 UBA3Q8TBC4 463 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 RLN3Q8WXF3 142 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 PIGKQ92643 395 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 EDEM2Q9BV94 578 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 NUSAP1Q9BXS6 441 aaKnown RBP10.84□□□□□ -0.67
LINC00564-201ENST00000567258 ULBP1Q9BZM6 244 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 CNGB3Q9NQW8 809 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 ABCC13Q9NSE7 274 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 STARD13Q9Y3M8 1113 aa10.84□□□□□ -0.67
LINC00564-201ENST00000567258 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 M0QYV0 167 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 GFRA2O00451 464 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 NPC1O15118 1278 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 GREM1O60565 184 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 ADAM23O75077 832 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 NDUFS2O75306 463 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 AFPP02771 609 aaKnown RBP10.83□□□□□ -0.68
LINC00564-201ENST00000567258 KRT5P13647 590 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 NDUFV2P19404 249 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 STX17P56962 302 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 ZNF445P59923 1031 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 RPL6Q02878 288 aaKnown RBP10.83□□□□□ -0.68
LINC00564-201ENST00000567258 MORC3Q14149 939 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 TPD52L1Q16890 204 aaPredicted RBP10.83□□□□□ -0.68
LINC00564-201ENST00000567258 MPPE1Q53F39 396 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 SPDYCQ5MJ68 293 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 BSPRYQ5W0U4 402 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 EGFLAMQ63HQ2 1017 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 FOXR2Q6PJQ5 311 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 LCLAT1Q6UWP7 414 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 RABEPKQ7Z6M1 372 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 FMNL3Q8IVF7 1028 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 TMEFF1Q8IYR6 380 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 TRIML1Q8N9V2 468 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 KCTD13Q8WZ19 329 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 SRRTQ9BXP5 876 aaKnown RBP10.83□□□□□ -0.68
LINC00564-201ENST00000567258 SMOC1Q9H4F8 434 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 AGO1Q9UL18 857 aaKnown RBP10.83□□□□□ -0.68
LINC00564-201ENST00000567258 HBS1LQ9Y450 684 aaKnown RBP10.83□□□□□ -0.68
LINC00564-201ENST00000567258 SPTBN2O15020 2390 aa10.83□□□□□ -0.68
LINC00564-201ENST00000567258 CNOT1A5YKK6 2376 aaKnown RBP10.82□□□□□ -0.68
LINC00564-201ENST00000567258 TYW5A2RUC4 315 aaKnown RBP10.82□□□□□ -0.68
LINC00564-201ENST00000567258 ANTXRLA6NF34 631 aa10.82□□□□□ -0.68
LINC00564-201ENST00000567258 O00370 1275 aa10.82□□□□□ -0.68
LINC00564-201ENST00000567258 TRIM24O15164 1050 aa10.82□□□□□ -0.68
LINC00564-201ENST00000567258 MED7O43513 233 aa10.82□□□□□ -0.68
LINC00564-201ENST00000567258 MAN1A2O60476 641 aa10.82□□□□□ -0.68
LINC00564-201ENST00000567258 SYNCRIPO60506 623 aaKnown RBP10.82□□□□□ -0.68
LINC00564-201ENST00000567258 FBXO21O94952 628 aa10.82□□□□□ -0.68
LINC00564-201ENST00000567258 HNRNPLP14866 589 aaKnown RBP eCLIP10.82□□□□□ -0.68
LINC00564-201ENST00000567258 BCKDHBP21953 392 aa10.82□□□□□ -0.68
LINC00564-201ENST00000567258 ZNF132P52740 706 aa10.82□□□□□ -0.68
LINC00564-201ENST00000567258 ATXN3P54252 364 aaPredicted RBP10.82□□□□□ -0.68
LINC00564-201ENST00000567258 UBE2HP62256 183 aa10.82□□□□□ -0.68
LINC00564-201ENST00000567258 GCNT1Q02742 428 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms