RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 SYPL2Q5VXT5 272 aa24.06■■□□□ 1.44
LINC00543-201ENST00000567234 OVOS1Q6IE37 1185 aa24.06■■□□□ 1.44
LINC00543-201ENST00000567234 SH3GL3Q99963 347 aa24.06■■□□□ 1.44
LINC00543-201ENST00000567234 TMEM30AQ9NV96 361 aa24.06■■□□□ 1.44
LINC00543-201ENST00000567234 FETUBQ9UGM5 382 aa24.06■■□□□ 1.44
LINC00543-201ENST00000567234 XPO7Q9UIA9 1087 aaKnown RBP24.06■■□□□ 1.44
LINC00543-201ENST00000567234 SF3B1O75533 1304 aaKnown RBP eCLIP24.06■■□□□ 1.44
LINC00543-201ENST00000567234 COL4A4P53420 1690 aaPredicted RBP24.06■■□□□ 1.44
LINC00543-201ENST00000567234 NLRC5Q86WI3 1866 aa24.06■■□□□ 1.44
LINC00543-201ENST00000567234 YJEFN3A6XGL0 299 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 HACD1B0YJ81 288 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 E7ENQ6 273 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 H3BRJ5 948 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 TMEM189-UBE2V1I3L0A0 370 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 I3L4J1 428 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 ARVCFO00192 962 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 CAPN9O14815 690 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 LTFP02788 710 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 COL6A1P12109 1028 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 RBL1P28749 1068 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 MAGEA6P43360 314 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 CACNA2D1P54289 1103 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 RNASELQ05823 741 aaKnown RBP24.05■■□□□ 1.44
LINC00543-201ENST00000567234 FASTKD3Q14CZ7 662 aaKnown RBP24.05■■□□□ 1.44
LINC00543-201ENST00000567234 PM20D1Q6GTS8 502 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 HFE2Q6ZVN8 426 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 ARHGEF2Q92974 986 aaKnown RBP24.05■■□□□ 1.44
LINC00543-201ENST00000567234 ZNF333Q96JL9 665 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 KANSL3Q9P2N6 904 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 OGDHLQ9ULD0 1010 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 PCDHB8Q9UN66 801 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 ACTL7BQ9Y614 415 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 TMEM63AO94886 807 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 PHBP35232 272 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 DSC1Q08554 894 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 SCAPQ12770 1279 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 NR1H3Q13133 447 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 E2F5Q15329 346 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 CCDC38Q502W7 563 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 NCBP2-AS2Q69YL0 99 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 GPRIN1Q7Z2K8 1008 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 TRPM8Q7Z2W7 1104 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 URGCPQ8TCY9 931 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 PYROXD1Q8WU10 500 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 QKIQ96PU8 341 aaKnown RBP eCLIP24.05■■□□□ 1.44
LINC00543-201ENST00000567234 DMAP1Q9NPF5 467 aaPredicted RBP24.05■■□□□ 1.44
LINC00543-201ENST00000567234 NAALADL1Q9UQQ1 740 aa24.05■■□□□ 1.44
LINC00543-201ENST00000567234 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.05■■□□□ 1.44
LINC00543-201ENST00000567234 GCATO75600 419 aa24.04■■□□□ 1.44
LINC00543-201ENST00000567234 F9P00740 461 aa24.04■■□□□ 1.44
LINC00543-201ENST00000567234 GOT1P17174 413 aa24.04■■□□□ 1.44
LINC00543-201ENST00000567234 PITX1P78337 314 aaPredicted RBP24.04■■□□□ 1.44
LINC00543-201ENST00000567234 TSPY1Q01534 308 aa24.04■■□□□ 1.44
LINC00543-201ENST00000567234 PAN2Q504Q3 1202 aaKnown RBP24.04■■□□□ 1.44
LINC00543-201ENST00000567234 CMPK2Q5EBM0 449 aa24.04■■□□□ 1.44
LINC00543-201ENST00000567234 EFHC2Q5JST6 749 aa24.04■■□□□ 1.44
LINC00543-201ENST00000567234 FNBP1LQ5T0N5 605 aa24.04■■□□□ 1.44
LINC00543-201ENST00000567234 BEND5Q7L4P6 421 aa24.04■■□□□ 1.44
LINC00543-201ENST00000567234 ATP11CQ8NB49 1132 aa24.04■■□□□ 1.44
LINC00543-201ENST00000567234 NSMCE1Q8WV22 266 aa24.04■■□□□ 1.44
LINC00543-201ENST00000567234 SELENOSQ9BQE4 189 aa24.04■■□□□ 1.44
LINC00543-201ENST00000567234 TRIM62Q9BVG3 475 aa24.04■■□□□ 1.44
LINC00543-201ENST00000567234 BAIAP2L1Q9UHR4 511 aa24.04■■□□□ 1.44
LINC00543-201ENST00000567234 EXOC1LA0A1B0GW35 172 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 TCRBV7S3A2A0A539 114 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 GOLGA8MH3BSY2 632 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 ZNF189O75820 626 aaPredicted RBP24.03■■□□□ 1.44
LINC00543-201ENST00000567234 USP17L7P0C7H9 530 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 CHN1P15882 459 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 IBSPP21815 317 aaPredicted RBP24.03■■□□□ 1.44
LINC00543-201ENST00000567234 GBE1Q04446 702 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 SLC10A2Q12908 348 aaPredicted RBP24.03■■□□□ 1.44
LINC00543-201ENST00000567234 NOMO2Q5JPE7 1267 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 BHLHA9Q7RTU4 235 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 TEX9Q8N6V9 391 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 CFAP61Q8NHU2 1237 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 RNF139Q8WU17 664 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 ATXN2LQ8WWM7 1075 aaKnown RBP24.03■■□□□ 1.44
LINC00543-201ENST00000567234 OLFM3Q96PB7 478 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 KLC2Q9H0B6 622 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 VPS37BQ9H9H4 285 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 PIGVQ9NUD9 493 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 AMPD1P23109 780 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 ADRA1BP35368 520 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 SKIV2L2P42285 1042 aaKnown RBP24.03■■□□□ 1.44
LINC00543-201ENST00000567234 ZNF135P52742 658 aaPredicted RBP24.03■■□□□ 1.44
LINC00543-201ENST00000567234 PYROXD2Q8N2H3 581 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 SLC7A14Q8TBB6 771 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 LINC01599Q8WXQ3 324 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 MAGEB5Q9BZ81 275 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 ARHGEF4Q9NR80 690 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 RAB6BQ9NRW1 208 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 DTLQ9NZJ0 730 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 SLC24A2Q9UI40 661 aa24.03■■□□□ 1.44
LINC00543-201ENST00000567234 ZNF638Q14966 1978 aaKnown RBP24.03■■□□□ 1.44
LINC00543-201ENST00000567234 KLHL33A6NCF5 533 aa24.02■■□□□ 1.44
LINC00543-201ENST00000567234 ANKRD33BA6NCL7 494 aa24.02■■□□□ 1.44
LINC00543-201ENST00000567234 DGKIO75912 1065 aa24.02■■□□□ 1.44
LINC00543-201ENST00000567234 BDNFP23560 247 aa24.02■■□□□ 1.44
LINC00543-201ENST00000567234 MNX1P50219 401 aaPredicted RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms