RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 UBA2Q9UBT2 640 aaPredicted RBP4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 PKP3Q9Y446 797 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 SNX13Q9Y5W8 968 aa4.46□□□□□ -1.69
LPCAT2-208ENST00000566915 DCDC2CA8MYV0 355 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 ADM5C9JUS6 153 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 FSCN2O14926 492 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 SNAP91O60641 907 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 RHOBTB1O94844 696 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 TGDSO95455 350 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 LDLRP01130 860 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 ITGAVP06756 1048 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 MYL3P08590 195 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 ATP6V1B1P15313 513 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 ZNF23P17027 643 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 DRD4P21917 467 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 SERPINB5P36952 375 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 LHX1P48742 406 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 NCKAP1LP55160 1127 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 RTP1P59025 263 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 PTPN11Q06124 597 aaPredicted RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 SFSWAPQ12872 951 aaKnown RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 INAQ16352 499 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 PTRHD1Q6GMV3 140 aaKnown RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 PKN3Q6P5Z2 889 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 NUP93Q8N1F7 819 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 GDPD5Q8WTR4 605 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 S100ZQ8WXG8 99 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 TMEM143Q96AN5 459 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 ZBTB10Q96DT7 871 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 TMEM176AQ96HP8 235 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 VPS50Q96JG6 964 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 SPON2Q9BUD6 331 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 HMX1Q9NP08 348 aaPredicted RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 SARS2Q9NP81 518 aaKnown RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 GIMAP4Q9NUV9 329 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 KLHL11Q9NVR0 708 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 TUBA8Q9NY65 449 aaPredicted RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 SELENONQ9NZV5 590 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 NDUFAF1Q9Y375 327 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 C5P01031 1676 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 PRR23D1E9PI22 279 aaPredicted RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 H3BNX3 289 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 SUPT7LO94864 414 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 ANXA6P08133 673 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 PRR23D2P0DMB1 279 aaPredicted RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 HLA-DPA1P20036 260 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 GRIK1P39086 918 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 POLD2P49005 469 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 CHN2P52757 468 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 CSE1LP55060 971 aaKnown RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 BST2Q10589 180 aaKnown RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 BNIP2Q12982 314 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 FRG1Q14331 258 aaKnown RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 RFX4Q33E94 735 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 MDH1BQ5I0G3 518 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 HYIQ5T013 277 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 MARK2Q7KZI7 788 aaKnown RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 MAP4K3Q8IVH8 894 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 DEFB107AQ8IZN7 70 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 LEMD2Q8NC56 503 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 ACTRT2Q8TDY3 377 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 FNIP1Q8TF40 1166 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 AFG1LQ8WV93 481 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 NSMCE2Q96MF7 247 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 AGAP3Q96P47 875 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 INPP4AQ96PE3 977 aaPredicted RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 KLF6Q99612 283 aaPredicted RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 TARS2Q9BW92 718 aaKnown RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 MYLK2Q9H1R3 596 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 DNAJC18Q9H819 358 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 PLGRKTQ9HBL7 147 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 TMEM161AQ9NX61 479 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 FETUBQ9UGM5 382 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 KLHL3Q9UH77 587 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 CAB39Q9Y376 341 aaPredicted RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 SQORQ9Y6N5 450 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 ADGRA2Q96PE1 1338 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 PDZK1P1A8MUH7 402 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 NKRFO15226 690 aaKnown RBP eCLIP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 ATMINO43313 823 aaPredicted RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 PDE9AO76083 593 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 NPTXRO95502 500 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 SERPINA6P08185 405 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 ODC1P11926 461 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 BGNP21810 368 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 FECHP22830 423 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 CD151P48509 253 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 RENBPP51606 427 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 BNC1Q01954 994 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 OVGP1Q12889 678 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 NFYCQ13952 458 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 NCF4Q15080 339 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 TAB1Q15750 504 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 DCAF6Q58WW2 860 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 SPDYAQ5MJ70 313 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 STRA8Q7Z7C7 330 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 CBWD2Q8IUF1 395 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 CENPLQ8N0S6 344 aaPredicted RBP4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 DHRSXQ8N5I4 330 aa4.46□□□□□ -1.7
LPCAT2-208ENST00000566915 RP9Q8TA86 221 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms