RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 CAPN10Q9HC96 672 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 METTL14Q9HCE5 456 aaKnown RBP12.48□□□□□ -0.41
UBR1-206ENST00000566493 FSCN3Q9NQT6 498 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 ABCC13Q9NSE7 274 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 ELOVL2Q9NXB9 296 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 HBS1LQ9Y450 684 aaKnown RBP12.48□□□□□ -0.41
UBR1-206ENST00000566493 CACNA1BQ00975 2339 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 TRIM49BA6NDI0 452 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 MEI4A8MW99 385 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 TULP2O00295 520 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 ACADMP11310 421 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 LCP1P13796 627 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 RDXP35241 583 aaKnown RBP12.47□□□□□ -0.41
UBR1-206ENST00000566493 PPP1R2P41236 205 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 PMS1P54277 932 aaKnown RBP12.47□□□□□ -0.41
UBR1-206ENST00000566493 ZNF445P59923 1031 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 CETN1Q12798 172 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 SEMA3BQ13214 749 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 ZNF234Q14588 700 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 TRIP4Q15650 581 aaPredicted RBP12.47□□□□□ -0.41
UBR1-206ENST00000566493 BSPRYQ5W0U4 402 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 SERPINA13PQ6UXR4 307 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 MINDY1Q8N5J2 469 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 KCTD13Q8WZ19 329 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 EDEM1Q92611 657 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 PRCCQ92733 491 aaPredicted RBP12.47□□□□□ -0.41
UBR1-206ENST00000566493 SLC35C1Q96A29 364 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 SIPA1Q96FS4 1042 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 P2RY11Q96G91 374 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 TOE1Q96GM8 510 aaKnown RBP12.47□□□□□ -0.41
UBR1-206ENST00000566493 DHTKD1Q96HY7 919 aaPredicted RBP12.47□□□□□ -0.41
UBR1-206ENST00000566493 TIGD1Q96MW7 591 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 NT5C1BQ96P26 610 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 ITM2CQ9NQX7 267 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 SFMBT1Q9UHJ3 866 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 PCDHB4Q9Y5E5 795 aa12.47□□□□□ -0.41
UBR1-206ENST00000566493 YJEFN3A6XGL0 299 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 UPK3BL1B0FP48 263 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 UPK3BL2E5RIL1 263 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 E7ENQ6 273 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 O00370 1275 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 TSPAN3O60637 253 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 EPHX1P07099 455 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 PROS1P07225 676 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 PAEPP09466 180 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 FMO5P49326 533 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 NUCB2P80303 420 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 ENPP2Q13822 863 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 CCDC40Q4G0X9 1142 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 TMEM270Q6UE05 265 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 LCLAT1Q6UWP7 414 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 UNQ6494/PRO21346Q6UXR6 183 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 TMPRSS6Q8IU80 811 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 FAM217AQ8IXS0 508 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 ENGASEQ8NFI3 743 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 GOLGA1Q92805 767 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 ERCC4Q92889 916 aaPredicted RBP12.46□□□□□ -0.41
UBR1-206ENST00000566493 TMA16Q96EY4 203 aaKnown RBP12.46□□□□□ -0.41
UBR1-206ENST00000566493 CEP63Q96MT8 703 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 GPR174Q9BXC1 333 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 MKRN2Q9H000 416 aaKnown RBP12.46□□□□□ -0.41
UBR1-206ENST00000566493 CD93Q9NPY3 652 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 CNGB3Q9NQW8 809 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 PLA2G4CQ9UP65 541 aa12.46□□□□□ -0.41
UBR1-206ENST00000566493 GON4LQ3T8J9 2241 aa12.46□□□□□ -0.42
UBR1-206ENST00000566493 ASCC3Q8N3C0 2202 aaKnown RBP12.46□□□□□ -0.42
UBR1-206ENST00000566493 LATS1O95835 1130 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 NCAM1P13591 858 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 SPINK2P20155 84 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 MAOBP27338 520 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 TPMTP51580 245 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 DAOAP59103 153 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 SIM1P81133 766 aaPredicted RBP12.45□□□□□ -0.42
UBR1-206ENST00000566493 HNRNPDQ14103 355 aaKnown RBP12.45□□□□□ -0.42
UBR1-206ENST00000566493 STILQ15468 1287 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 FNDC3BQ53EP0 1204 aaKnown RBP12.45□□□□□ -0.42
UBR1-206ENST00000566493 ADGRF1Q5T601 910 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 ISM2Q6H9L7 571 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 BHLHA9Q7RTU4 235 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 PIP4P1Q86T03 277 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 SCML4Q8N228 414 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 PPM1KQ8N3J5 372 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 CADM4Q8NFZ8 388 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 SPATA20Q8TB22 786 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 WFIKKN2Q8TEU8 576 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 SORCS1Q8WY21 1168 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 IRGQQ8WZA9 623 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 NUP58Q9BVL2 599 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 ADAM33Q9BZ11 813 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 ZDHHC5Q9C0B5 715 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 MIR1-1HGQ9H1L0 117 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 WSB2Q9NYS7 404 aaPredicted RBP12.45□□□□□ -0.42
UBR1-206ENST00000566493 USP36Q9P275 1121 aaKnown RBP12.45□□□□□ -0.42
UBR1-206ENST00000566493 CLEC4EQ9ULY5 219 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 PCDHB9Q9Y5E1 797 aa12.45□□□□□ -0.42
UBR1-206ENST00000566493 KMT2BQ9UMN6 2715 aaPredicted RBP12.45□□□□□ -0.42
UBR1-206ENST00000566493 MAP1BP46821 2468 aaKnown RBP12.44□□□□□ -0.42
UBR1-206ENST00000566493 PCDH15Q96QU1 1955 aa12.44□□□□□ -0.42
UBR1-206ENST00000566493 A0A1B0GTW7 788 aa12.44□□□□□ -0.42
UBR1-206ENST00000566493 SPAARA0A1B0GVQ0 90 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms