RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 LRFN1Q9P244 771 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 NDRG4Q9ULP0 352 aaKnown RBP4.74□□□□□ -1.65
LINC00561-201ENST00000565815 CDY1Q9Y6F8 540 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 MED23Q9ULK4 1368 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 F5H697 171 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 KCNQ3O43525 872 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 GPTP24298 496 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 MST1P26927 711 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 RIPK4P57078 832 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 KRTAP10-2P60368 255 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 TAF5Q15542 800 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 UBE2Q1Q7Z7E8 422 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 ZSCAN30Q86W11 494 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 CCDC28AQ8IWP9 274 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 EDAQ92838 391 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 PPP2R3CQ969Q6 453 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 MCRS1Q96EZ8 462 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 NAP1L5Q96NT1 182 aaPredicted RBP4.74□□□□□ -1.65
LINC00561-201ENST00000565815 PCDHAC1Q9H158 963 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 FSCN3Q9NQT6 498 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 DKK3Q9UBP4 350 aa4.74□□□□□ -1.65
LINC00561-201ENST00000565815 ARID1BQ8NFD5 2236 aaPredicted RBP4.73□□□□□ -1.65
LINC00561-201ENST00000565815 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 PLA2G6O60733 806 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 ZNF853P0CG23 659 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 ACVR2AP27037 513 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 PRKAG1P54619 331 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 TNFAIP2Q03169 654 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 RAB30Q15771 203 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 CCDC152Q4G0S7 254 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 CCDC38Q502W7 563 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 PLAG1Q6DJT9 500 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 KIAA0408Q6ZU52 694 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 MAVSQ7Z434 540 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 ZNF276Q8N554 614 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 C11orf44Q8N8P7 122 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 CHST13Q8NET6 341 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 SSH3Q8TE77 659 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 SEPSECSQ9HD40 501 aaKnown RBP4.73□□□□□ -1.65
LINC00561-201ENST00000565815 POLLQ9UGP5 575 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 CEP83Q9Y592 693 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 CENPVL1A0A0U1RR11 272 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 CCDC189A1A4V9 331 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 GOLGA6L6A8MZA4 724 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 K7ESM1 405 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 CREB3O43889 395 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 UFL1O94874 794 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 MBD3O95983 291 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 CETPP11597 493 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 ACRV1P26436 265 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 KLRK1P26718 216 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 PRKAR2BP31323 418 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 NPTX2P47972 431 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 CPT1AP50416 773 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 DYRK1AQ13627 763 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 PRKD1Q15139 912 aaPredicted RBP4.73□□□□□ -1.65
LINC00561-201ENST00000565815 RASGRP2Q7LDG7 609 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 RPAP2Q8IXW5 612 aaPredicted RBP4.73□□□□□ -1.65
LINC00561-201ENST00000565815 SNX19Q92543 992 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 ZBED3Q96IU2 234 aaPredicted RBP4.73□□□□□ -1.65
LINC00561-201ENST00000565815 VPS45Q9NRW7 570 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 ZMYND8Q9ULU4 1186 aaPredicted RBP4.73□□□□□ -1.65
LINC00561-201ENST00000565815 FPGT-TNNI3KV9GXZ4 949 aa4.73□□□□□ -1.65
LINC00561-201ENST00000565815 NPC1O15118 1278 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 MUSKO15146 869 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 REC8O95072 547 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 FESP07332 822 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 SELENOPP49908 381 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 DGKKQ5KSL6 1271 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 MANEALQ5VSG8 457 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 FBXO38Q6PIJ6 1188 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 GPR149Q86SP6 731 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 METTL25Q8N6Q8 603 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 ATG4AQ8WYN0 398 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 FAM89AQ96GI7 184 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 GPR20Q99678 358 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 ACTRT3Q9BYD9 372 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 TPSD1Q9BZJ3 242 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 ANKRD2Q9GZV1 360 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 PDCL3Q9H2J4 239 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 MTMR10Q9NXD2 777 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 LUZP4Q9P127 313 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 HPSEQ9Y251 543 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 LRCH1Q9Y2L9 728 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 TCAF1Q9Y4C2 921 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 SSC5DA1L4H1 1573 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 CEP350Q5VT06 3117 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 PTPRCP08575 1304 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 PRAMEF33A0A0G2JMD5 474 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 LOC102723971A0A1B0GUV8 181 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 PRAMEF10O60809 474 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 PIAS2O75928 621 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 MSNP26038 577 aaKnown RBP4.72□□□□□ -1.65
LINC00561-201ENST00000565815 VIPR2P41587 438 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 SLC29A2Q14542 456 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 DLGAP5Q15398 846 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 FNDC7Q5VTL7 733 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 MYLK4Q86YV6 388 aaPredicted RBP4.72□□□□□ -1.65
LINC00561-201ENST00000565815 TMPRSS6Q8IU80 811 aa4.72□□□□□ -1.65
LINC00561-201ENST00000565815 SLC44A3Q8N4M1 653 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms