RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 DOCK9Q9BZ29 2069 aa15.35■□□□□ 0.05
USB1-210ENST00000565151 LTFP02788 710 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 ITPKAP23677 461 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 PRKCHP24723 683 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 HLA-FP30511 346 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 PITX1P78337 314 aaPredicted RBP15.34■□□□□ 0.05
USB1-210ENST00000565151 DPCR1Q3MIW9 517 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 FUT11Q495W5 492 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 PREPLQ4J6C6 727 aaPredicted RBP15.34■□□□□ 0.05
USB1-210ENST00000565151 SYPL2Q5VXT5 272 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 RNF43Q68DV7 783 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 RFWD3Q6PCD5 774 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 TRMT11Q7Z4G4 463 aaKnown RBP15.34■□□□□ 0.05
USB1-210ENST00000565151 KIAA0907Q7Z7F0 614 aaPredicted RBP15.34■□□□□ 0.05
USB1-210ENST00000565151 SLC41A1Q8IVJ1 513 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 ZNF606Q8WXB4 792 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 IRGQQ8WZA9 623 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 PIGKQ92643 395 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 LMLNQ96KR4 655 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 FCRL2Q96LA5 508 aaPredicted RBP15.34■□□□□ 0.05
USB1-210ENST00000565151 HSFY1Q96LI6 401 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 SLC4A5Q9BY07 1137 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 MKRN2Q9H000 416 aaKnown RBP15.34■□□□□ 0.05
USB1-210ENST00000565151 CLSTN2Q9H4D0 955 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 OLA1Q9NTK5 396 aaKnown RBP15.34■□□□□ 0.05
USB1-210ENST00000565151 ELOVL2Q9NXB9 296 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 NAALADL1Q9UQQ1 740 aa15.34■□□□□ 0.05
USB1-210ENST00000565151 ATXN2Q99700 1313 aaKnown RBP15.34■□□□□ 0.05
USB1-210ENST00000565151 KCNJ18B7U540 433 aa15.33■□□□□ 0.04
USB1-210ENST00000565151 PAPSS1O43252 624 aaPredicted RBP15.33■□□□□ 0.04
USB1-210ENST00000565151 PNMA6AP0CW24 399 aaPredicted RBP15.33■□□□□ 0.04
USB1-210ENST00000565151 KRT5P13647 590 aa15.33■□□□□ 0.04
USB1-210ENST00000565151 PON1P27169 355 aa15.33■□□□□ 0.04
USB1-210ENST00000565151 ZNF234Q14588 700 aa15.33■□□□□ 0.04
USB1-210ENST00000565151 TAF5Q15542 800 aa15.33■□□□□ 0.04
USB1-210ENST00000565151 ADGRF1Q5T601 910 aa15.33■□□□□ 0.04
USB1-210ENST00000565151 PEAR1Q5VY43 1037 aaPredicted RBP15.33■□□□□ 0.04
USB1-210ENST00000565151 ADIPOR2Q86V24 386 aa15.33■□□□□ 0.04
USB1-210ENST00000565151 ADAM32Q8TC27 787 aa15.33■□□□□ 0.04
USB1-210ENST00000565151 DQX1Q8TE96 717 aaKnown RBP15.33■□□□□ 0.04
USB1-210ENST00000565151 DDI1Q8WTU0 396 aa15.33■□□□□ 0.04
USB1-210ENST00000565151 RNF139Q8WU17 664 aa15.33■□□□□ 0.04
USB1-210ENST00000565151 PRICKLE1Q96MT3 831 aaPredicted RBP15.33■□□□□ 0.04
USB1-210ENST00000565151 EDEM2Q9BV94 578 aa15.33■□□□□ 0.04
USB1-210ENST00000565151 XPO7Q9UIA9 1087 aaKnown RBP15.33■□□□□ 0.04
USB1-210ENST00000565151 PILRBQ9UKJ0 227 aa15.33■□□□□ 0.04
USB1-210ENST00000565151 ASPMQ8IZT6 3477 aa15.33■□□□□ 0.04
USB1-210ENST00000565151 TPRP12270 2363 aaKnown RBP15.32■□□□□ 0.04
USB1-210ENST00000565151 PLXNA2O75051 1894 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 C4orf47A7E2U8 309 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 GIPC1O14908 333 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 FOXD2O60548 495 aaPredicted RBP15.32■□□□□ 0.04
USB1-210ENST00000565151 LETM1O95202 739 aaPredicted RBP15.32■□□□□ 0.04
USB1-210ENST00000565151 ADRB1P08588 477 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 COPAP53621 1224 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 CETN1Q12798 172 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 EIF4EBP2Q13542 120 aaPredicted RBP15.32■□□□□ 0.04
USB1-210ENST00000565151 STILQ15468 1287 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 ARHGAP44Q17R89 818 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 MIIPQ5JXC2 388 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 PIK3R6Q5UE93 754 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 LPCAT2Q7L5N7 544 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 CYP2U1Q7Z449 544 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 C11orf74Q86VG3 221 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 SHC3Q92529 594 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 SLC39A13Q96H72 371 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 LSM14BQ9BX40 385 aaKnown RBP15.32■□□□□ 0.04
USB1-210ENST00000565151 CYP8B1Q9UNU6 501 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 DOCK4Q8N1I0 1966 aa15.32■□□□□ 0.04
USB1-210ENST00000565151 E5RJQ4 531 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 MAP3K13O43283 966 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 IGLV3-25P01717 112 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 NCAM1P13591 858 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 HLA-EP13747 358 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 CD70P32970 193 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 HARS2P49590 506 aaKnown RBP15.31■□□□□ 0.04
USB1-210ENST00000565151 PTPRNQ16849 979 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 MPPE1Q53F39 396 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 HSP90AA4PQ58FG1 418 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 NUDT18Q6ZVK8 323 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 ANKS1BQ7Z6G8 1248 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 TMEM110Q86TL2 294 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 TAC4Q86UU9 113 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 CREBRFQ8IUR6 639 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 ZNF366Q8N895 744 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.31■□□□□ 0.04
USB1-210ENST00000565151 MLKLQ8NB16 471 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 CYB5D2Q8WUJ1 264 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 TMA16Q96EY4 203 aaKnown RBP15.31■□□□□ 0.04
USB1-210ENST00000565151 SLC2A11Q9BYW1 496 aa15.31■□□□□ 0.04
USB1-210ENST00000565151 KHNYNO15037 678 aaKnown RBP15.3■□□□□ 0.04
USB1-210ENST00000565151 THAP12O43422 761 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 ACSL4O60488 711 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 FBXO21O94952 628 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 LATS1O95835 1130 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 CYBBP04839 570 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 GNA15P30679 374 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 CLCN1P35523 988 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 MAP1BP46821 2468 aaKnown RBP15.3■□□□□ 0.04
USB1-210ENST00000565151 TBX4P57082 545 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms