RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 PRDM8Q9NQV8 689 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 LRRC4BQ9NT99 713 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 FAM105AQ9NUU6 356 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 VPS54Q9P1Q0 977 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 COPG2Q9UBF2 871 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 ARMCX3Q9UH62 379 aaPredicted RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 IPO11Q9UI26 975 aaKnown RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 PCDHA4Q9UN74 947 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 PLA2G4CQ9UP65 541 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 CTNND2Q9UQB3 1225 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 TLR6Q9Y2C9 796 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 CBY1Q9Y3M2 126 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 GRIP1Q9Y3R0 1128 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 ASB4Q9Y574 426 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 PPP2R3BQ9Y5P8 575 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 KCNE2Q9Y6J6 123 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 PSME4Q14997 1843 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 MYO5AQ9Y4I1 1855 aaKnown RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 MROH5Q6ZUA9 1318 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 RPTORQ8N122 1335 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 COL16A1Q07092 1604 aaPredicted RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 USP31Q70CQ4 1352 aa6.46□□□□□ -1.37
PTPN9-204ENST00000564970 A0A1W2PRG6 482 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 PRR23AA6NEV1 266 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 SAC3D1A6NKF1 404 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 RNF225M0QZC1 329 aaPredicted RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 PLK4O00444 970 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 ZNF263O14978 683 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 SNPHO15079 494 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 KIAA0391O15091 583 aaKnown RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 DYNC1LI2O43237 492 aaPredicted RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 SSX5O60225 188 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 RFPL2O75678 378 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 CRTAMO95727 393 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 UGT2B4P06133 528 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 YES1P07947 543 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 PRKAR1AP10644 381 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 CDH1P12830 882 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 HOXB3P14651 431 aaPredicted RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 ATP6V1B1P15313 513 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 NPR1P16066 1061 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 RAB3AP20336 220 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 GARTP22102 1010 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 MAOBP27338 520 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 RCVRNP35243 200 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 GRK3P35626 688 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 UGT2B10P36537 528 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 BMPR1AP36894 532 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 SERPINB5P36952 375 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 AFMP43652 599 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 RECQLP46063 649 aaPredicted RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 YWHAGP61981 247 aaKnown RBP eCLIP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 FLI1Q01543 452 aaPredicted RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 GALNT2Q10471 571 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 ILF2Q12905 390 aaKnown RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 TOP3AQ13472 1001 aaPredicted RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 RRP1BQ14684 758 aaKnown RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 OASLQ15646 514 aaKnown RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 LRIT3Q3SXY7 679 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 MCMDC2Q4G0Z9 681 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 CEP55Q53EZ4 464 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 FAM47CQ5HY64 1035 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 EPHA10Q5JZY3 1008 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 TEDDM1Q5T9Z0 273 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 GARNL3Q5VVW2 1013 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 RRAGBQ5VZM2 374 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 ITPRIPL1Q6GPH6 555 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 ALKBH2Q6NS38 261 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 ANKRD26P1Q6NSI1 321 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 FKBP9P1Q75LS8 142 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 SETD3Q86TU7 594 aaPredicted RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 MTDHQ86UE4 582 aaKnown RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 IGFN1Q86VF2 1251 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 RETREG3Q86VR2 466 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 CHSY1Q86X52 802 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 DNAAF5Q86Y56 855 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 PLCZ1Q86YW0 608 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 SULF1Q8IWU6 871 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 CHERPQ8IWX8 916 aaKnown RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 CTAGE3PQ8IX95 158 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 SRRM1Q8IYB3 904 aaKnown RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 ADGRG5Q8IZF4 528 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 XRN1Q8IZH2 1706 aaKnown RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 PIK3C3Q8NEB9 887 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 OR7D4Q8NG98 312 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 OR5T2Q8NGG2 359 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 OR52K2Q8NGK3 314 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 SETD7Q8WTS6 366 aaKnown RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 PDCD6IPQ8WUM4 868 aaKnown RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 SLC44A1Q8WWI5 657 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 SMG7Q92540 1137 aaKnown RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 PIK3R3Q92569 461 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 APBB2Q92870 758 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 ART4Q93070 314 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 DACT3Q96B18 629 aaPredicted RBP6.46□□□□□ -1.38
PTPN9-204ENST00000564970 HDAC11Q96DB2 347 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 PAGE5Q96GU1 130 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 MS4A14Q96JA4 679 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 MAP6Q96JE9 813 aa6.46□□□□□ -1.38
PTPN9-204ENST00000564970 ASB2Q96Q27 587 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms