RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 CNTN6Q9UQ52 1028 aa15.66■□□□□ 0.1
SPG7-210ENST00000564409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.66■□□□□ 0.1
SPG7-210ENST00000564409 CACNA1BQ00975 2339 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 IRAK2O43187 625 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 SYNCRIPO60506 623 aaKnown RBP15.65■□□□□ 0.1
SPG7-210ENST00000564409 NDUFS2O75306 463 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 AFPP02771 609 aaKnown RBP15.65■□□□□ 0.1
SPG7-210ENST00000564409 BMP6P22004 513 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 KCNA4P22459 653 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 ITPKAP23677 461 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 OXTRP30559 389 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 NOVA1P51513 510 aaKnown RBP15.65■□□□□ 0.1
SPG7-210ENST00000564409 KCNH2Q12809 1159 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 GEN1Q17RS7 908 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 PMF1Q6P1K2 205 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 ARMCX6Q7L4S7 300 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 ENOSF1Q7L5Y1 443 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 RBBP8NLQ8NC74 664 aaPredicted RBP15.65■□□□□ 0.1
SPG7-210ENST00000564409 EDEM1Q92611 657 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 TMA16Q96EY4 203 aaKnown RBP15.65■□□□□ 0.1
SPG7-210ENST00000564409 ZNF419Q96HQ0 510 aaPredicted RBP15.65■□□□□ 0.1
SPG7-210ENST00000564409 PRDM16Q9HAZ2 1276 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 TMEM74BQ9NUR3 256 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 SUSD2Q9UGT4 822 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 CTNND2Q9UQB3 1225 aa15.65■□□□□ 0.1
SPG7-210ENST00000564409 UPK3BL1B0FP48 263 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 UPK3BL2E5RIL1 263 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 M0QYV0 167 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 IGLV3-27P01718 113 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 LTFP02788 710 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 LCP1P13796 627 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 HOXD9P28356 352 aaPredicted RBP15.64■□□□□ 0.09
SPG7-210ENST00000564409 ACADSBP45954 432 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 RPL34P49207 117 aaKnown RBP15.64■□□□□ 0.09
SPG7-210ENST00000564409 SLC11A2P49281 568 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 ARID5AQ03989 594 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 GFPT1Q06210 699 aaPredicted RBP15.64■□□□□ 0.09
SPG7-210ENST00000564409 NNTQ13423 1086 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 FUT11Q495W5 492 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 WDR45BQ5MNZ6 344 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 PSAPL1Q6NUJ1 521 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 BEND5Q7L4P6 421 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 STK32AQ8WU08 396 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 NDRG1Q92597 394 aaKnown RBP15.64■□□□□ 0.09
SPG7-210ENST00000564409 P2RY11Q96G91 374 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 DDX50Q9BQ39 737 aaKnown RBP15.64■□□□□ 0.09
SPG7-210ENST00000564409 SRRTQ9BXP5 876 aaKnown RBP15.64■□□□□ 0.09
SPG7-210ENST00000564409 FBRSQ9HAH7 460 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 ITM2CQ9NQX7 267 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 USP36Q9P275 1121 aaKnown RBP15.64■□□□□ 0.09
SPG7-210ENST00000564409 SFMBT1Q9UHJ3 866 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 CYP8B1Q9UNU6 501 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 RAD54BQ9Y620 910 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 LAMA1P25391 3075 aa15.64■□□□□ 0.09
SPG7-210ENST00000564409 WASH3PC4AMC7 463 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 RNF225M0QZC1 329 aaPredicted RBP15.63■□□□□ 0.09
SPG7-210ENST00000564409 MED7O43513 233 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 IGLV3-19P01714 112 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 CFIP05156 583 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 SYPP08247 313 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 C7P10643 843 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 NCAM1P13591 858 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 GNSP15586 552 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 ENGP17813 658 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 CD6P30203 668 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 IL12RB1P42701 662 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 ATXN3P54252 364 aaPredicted RBP15.63■□□□□ 0.09
SPG7-210ENST00000564409 ZNF234Q14588 700 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 SH3PXD2AQ5TCZ1 1133 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 KIAA1324Q6UXG2 1013 aaKnown RBP15.63■□□□□ 0.09
SPG7-210ENST00000564409 KIAA0907Q7Z7F0 614 aaPredicted RBP15.63■□□□□ 0.09
SPG7-210ENST00000564409 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.63■□□□□ 0.09
SPG7-210ENST00000564409 CADM4Q8NFZ8 388 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 CIPCQ9C0C6 399 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 PCED1AQ9H1Q7 454 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 SLC32A1Q9H598 525 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 CAPN10Q9HC96 672 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 PLA2G4CQ9UP65 541 aa15.63■□□□□ 0.09
SPG7-210ENST00000564409 ADAMTS9Q9P2N4 1935 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 BIN1O00499 593 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 GABBR2O75899 941 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 ATP5BP06576 529 aaKnown RBP15.62■□□□□ 0.09
SPG7-210ENST00000564409 BRD2P25440 801 aaKnown RBP15.62■□□□□ 0.09
SPG7-210ENST00000564409 RGS7P49802 495 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 UBE2HP62256 183 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 SERPINA13PQ6UXR4 307 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 RRAGAQ7L523 313 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 TMPRSS6Q8IU80 811 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 SLC41A1Q8IVJ1 513 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 AHI1Q8N157 1196 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 PRCCQ92733 491 aaPredicted RBP15.62■□□□□ 0.09
SPG7-210ENST00000564409 SIPA1Q96FS4 1042 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 HSPA12BQ96MM6 686 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 ZSWIM1Q9BR11 485 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 INTS2Q9H0H0 1204 aaKnown RBP15.62■□□□□ 0.09
SPG7-210ENST00000564409 WSB2Q9NYS7 404 aaPredicted RBP15.62■□□□□ 0.09
SPG7-210ENST00000564409 KIAA1468Q9P260 1216 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 RWDD2AQ9UIY3 292 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 PCDH15Q96QU1 1955 aa15.62■□□□□ 0.09
SPG7-210ENST00000564409 EPG5Q9HCE0 2579 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms