RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 SYTL5Q8TDW5 730 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-209ENST00000564068 FAM136AQ96C01 138 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 DCUN1D1Q96GG9 259 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 MBOAT7Q96N66 472 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 MMP19Q99542 508 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 ARHGEF38Q9NXL2 777 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 HBS1LQ9Y450 684 aaKnown RBP12.94□□□□□ -0.34
COMMD4-209ENST00000564068 KLHL33A6NCF5 533 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 EEF2KO00418 725 aaKnown RBP12.94□□□□□ -0.34
COMMD4-209ENST00000564068 NRLP54845 237 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 WASHC5Q12768 1159 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 FSTL1Q12841 308 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 TMEM132DQ14C87 1099 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 TAF12Q16514 161 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 C6orf52Q5T4I8 152 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 APOBEC3HQ6NTF7 200 aaKnown RBP12.94□□□□□ -0.34
COMMD4-209ENST00000564068 C4orf22Q6V702 233 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 RCN3Q96D15 328 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 DACH2Q96NX9 599 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 EBF4Q9BQW3 602 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 PDCD2LQ9BRP1 358 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 NAT9Q9BTE0 207 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 WDR55Q9H6Y2 383 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-209ENST00000564068 LRRC40Q9H9A6 602 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 BCL9LQ86UU0 1499 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 KAT6AQ92794 2004 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 BCL10O95999 233 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 BPGMP07738 259 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 FDX1P10109 184 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 CAPRIN1Q14444 709 aaKnown RBP12.94□□□□□ -0.34
COMMD4-209ENST00000564068 MAPK11Q15759 364 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 ANKS1BQ7Z6G8 1248 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 C10orf107Q8IVU9 208 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 MICU2Q8IYU8 434 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 TRPC7Q9HCX4 862 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 GGA3Q9NZ52 723 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 RSL24D1Q9UHA3 163 aaKnown RBP12.94□□□□□ -0.34
COMMD4-209ENST00000564068 PCDHAC2Q9Y5I4 1007 aa12.94□□□□□ -0.34
COMMD4-209ENST00000564068 TMEM191CA6NGB0 347 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 PHGDHO43175 533 aaKnown RBP12.93□□□□□ -0.34
COMMD4-209ENST00000564068 TRMUO75648 421 aaKnown RBP12.93□□□□□ -0.34
COMMD4-209ENST00000564068 KRT8P05787 483 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 ARHGDIAP52565 204 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 ACTR3P61158 418 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 TDRPQ86YL5 185 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 BANPQ8N9N5 519 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 NETO2Q8NC67 525 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 SLC7A6OSQ96CW6 309 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-209ENST00000564068 PHF21BQ96EK2 531 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 SEPHS2Q99611 448 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 XPNPEP3Q9NQH7 507 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 DMAC2Q9NW81 257 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 SEPT3Q9UH03 358 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 DAPK2Q9UIK4 370 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 LNPEPQ9UIQ6 1025 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 CDH22Q9UJ99 828 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 AP4E1Q9UPM8 1137 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 GNEQ9Y223 722 aaKnown RBP12.93□□□□□ -0.34
COMMD4-209ENST00000564068 ACOT9Q9Y305 439 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 TMX2Q9Y320 296 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 CASZ1Q86V15 1759 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 KCNA2P16389 499 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 SERPINB10P48595 397 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 PLK1P53350 603 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 ZACNQ401N2 412 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 PLD3Q8IV08 490 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 SCUBE3Q8IX30 993 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 ZDHHC15Q96MV8 337 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 ZBTB18Q99592 522 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 CHD2O14647 1828 aaKnown RBP12.93□□□□□ -0.34
COMMD4-209ENST00000564068 A0A087WXM4 84 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 NR5A2O00482 541 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 UBDO15205 165 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 WDR46O15213 610 aaKnown RBP12.93□□□□□ -0.34
COMMD4-209ENST00000564068 TIMM44O43615 452 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 PMPCBO75439 489 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 TCEA3O75764 348 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 OATP04181 439 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 MRC1P22897 1456 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 ETFBP38117 255 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 PHF13Q86YI8 300 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-209ENST00000564068 JOSD2Q8TAC2 188 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 APBB2Q92870 758 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 TUBGCP3Q96CW5 907 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 NMRAL1Q9HBL8 299 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 PTPRHQ9HD43 1115 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 BLOC1S6Q9UL45 172 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 TDRKHQ9Y2W6 561 aaKnown RBP12.93□□□□□ -0.34
COMMD4-209ENST00000564068 PFDN6O15212 129 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 INPP4BO15327 924 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 SNX2O60749 519 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 TGDSO95455 350 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 ITGA2BP08514 1039 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 SNHG28P0DPA3 235 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-209ENST00000564068 EIF4BP23588 611 aaKnown RBP12.93□□□□□ -0.34
COMMD4-209ENST00000564068 TUBP50607 506 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 TSPY1Q01534 308 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 GAD2Q05329 585 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 TMC7Q7Z402 723 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms