RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 NTSR1P30989 418 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 GBP1P32455 592 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 SOX5P35711 763 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 STAT1P42224 750 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 PXNP49023 591 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-207ENST00000564060 CDK17Q00537 523 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 MTA1Q13330 715 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 EIF4HQ15056 248 aaKnown RBP20.65■□□□□ 0.9
CMTM3-207ENST00000564060 PTPN20Q4JDL3 420 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 DCAF6Q58WW2 860 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 MPP7Q5T2T1 576 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 EMC10Q5UCC4 262 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 SYPL2Q5VXT5 272 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 OR6B2Q6IFH4 312 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 FAM183BPQ6ZVS7 135 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 ANKS1BQ7Z6G8 1248 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-207ENST00000564060 TAC4Q86UU9 113 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 C11orf74Q86VG3 221 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 RASSF3Q86WH2 238 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 GPR161Q8N6U8 529 aaKnown RBP20.65■□□□□ 0.9
CMTM3-207ENST00000564060 EPS8L1Q8TE68 723 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 FCRL2Q96LA5 508 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-207ENST00000564060 HSD3B7Q9H2F3 369 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 NLRC4Q9NPP4 1024 aa20.65■□□□□ 0.9
CMTM3-207ENST00000564060 PTPRZ1P23471 2315 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-207ENST00000564060 ZBTB24O43167 697 aaPredicted RBP20.64■□□□□ 0.89
CMTM3-207ENST00000564060 TRUB2O95900 331 aaKnown RBP20.64■□□□□ 0.89
CMTM3-207ENST00000564060 SLC2A3P11169 496 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 CHRM1P11229 460 aaPredicted RBP20.64■□□□□ 0.89
CMTM3-207ENST00000564060 KLK7P49862 253 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 JAM2P57087 298 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 SLC6A3Q01959 620 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 FILIP1LQ4L180 1135 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 ANO7Q6IWH7 933 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 OLFML1Q6UWY5 402 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 SLC26A9Q7LBE3 791 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 NOP9Q86U38 636 aaKnown RBP20.64■□□□□ 0.89
CMTM3-207ENST00000564060 CHPFQ8IZ52 775 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 ZNF397Q8NF99 534 aaPredicted RBP20.64■□□□□ 0.89
CMTM3-207ENST00000564060 SLC39A13Q96H72 371 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 SLC2A13Q96QE2 648 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 FAM204AQ9H8W3 233 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 POLR3BQ9NW08 1133 aaPredicted RBP20.64■□□□□ 0.89
CMTM3-207ENST00000564060 TMEM51Q9NW97 253 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.64■□□□□ 0.89
CMTM3-207ENST00000564060 RRN3Q9NYV6 651 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 TJP2Q9UDY2 1190 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 SLC12A6Q9UHW9 1150 aa20.64■□□□□ 0.89
CMTM3-207ENST00000564060 PRRT4C9JH25 899 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 GFRA2O00451 464 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 TSPAN3O60637 253 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 GFPT2O94808 682 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 IGLV3-25P01717 112 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 ERBB2P04626 1255 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 HOXB2P14652 356 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 HNRNPLP14866 589 aaKnown RBP eCLIP20.63■□□□□ 0.89
CMTM3-207ENST00000564060 HOXD9P28356 352 aaPredicted RBP20.63■□□□□ 0.89
CMTM3-207ENST00000564060 SCNN1AP37088 669 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 TPM4P67936 248 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 USP39Q53GS9 565 aaKnown RBP20.63■□□□□ 0.89
CMTM3-207ENST00000564060 TAF3Q5VWG9 929 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 TMEM92Q6UXU6 159 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 APTXQ7Z2E3 356 aaKnown RBP20.63■□□□□ 0.89
CMTM3-207ENST00000564060 CACNA2D4Q7Z3S7 1137 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 ERICH1Q86X53 443 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 DHX40Q8IX18 779 aaKnown RBP20.63■□□□□ 0.89
CMTM3-207ENST00000564060 DEFB106AQ8N104 65 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 HJURPQ8NCD3 748 aaPredicted RBP20.63■□□□□ 0.89
CMTM3-207ENST00000564060 ADAM32Q8TC27 787 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 DDX1Q92499 740 aaKnown RBP20.63■□□□□ 0.89
CMTM3-207ENST00000564060 C18orf8Q96DM3 657 aa20.63■□□□□ 0.89
CMTM3-207ENST00000564060 PIWIL1Q96J94 861 aaKnown RBP20.63■□□□□ 0.89
CMTM3-207ENST00000564060 BCCIPQ9P287 314 aaKnown RBP eCLIP20.63■□□□□ 0.89
CMTM3-207ENST00000564060 TIMM44O43615 452 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 ADAM23O75077 832 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 DAB1O75553 588 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 CAVIN2O95810 425 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 RETP07949 1114 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 ATP1A3P13637 1013 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 NOS2P35228 1153 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 GABRB2P47870 512 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 CDR2Q01850 454 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 SRSF5Q13243 272 aaKnown RBP20.62■□□□□ 0.89
CMTM3-207ENST00000564060 FAM133BQ5BKY9 247 aaKnown RBP20.62■□□□□ 0.89
CMTM3-207ENST00000564060 PIK3R6Q5UE93 754 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 EGFLAMQ63HQ2 1017 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 TRIM72Q6ZMU5 477 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 CCDC117Q8IWD4 279 aaPredicted RBP20.62■□□□□ 0.89
CMTM3-207ENST00000564060 ATP6V0D2Q8N8Y2 350 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 WFIKKN2Q8TEU8 576 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 LOXL4Q96JB6 756 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 BTN2A3PQ96KV6 586 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 DDIT4Q9NX09 232 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 STAP1Q9ULZ2 295 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 THADAQ6YHU6 1953 aa20.62■□□□□ 0.89
CMTM3-207ENST00000564060 CKAP5Q14008 2032 aa20.61■□□□□ 0.89
CMTM3-207ENST00000564060 SYCE3A1L190 88 aa20.61■□□□□ 0.89
CMTM3-207ENST00000564060 ANTXRLA6NF34 631 aa20.61■□□□□ 0.89
CMTM3-207ENST00000564060 LRP3O75074 770 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms