RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 FSCBQ5H9T9 825 aa12.71□□□□□ -0.37
SCAMP2-204ENST00000563829 IL23RQ5VWK5 629 aa12.71□□□□□ -0.37
SCAMP2-204ENST00000563829 SNRNP48Q6IEG0 339 aaKnown RBP12.71□□□□□ -0.37
SCAMP2-204ENST00000563829 DNAJC24Q6P3W2 148 aa12.71□□□□□ -0.37
SCAMP2-204ENST00000563829 C10orf107Q8IVU9 208 aa12.71□□□□□ -0.37
SCAMP2-204ENST00000563829 C12orf56Q8IXR9 622 aa12.71□□□□□ -0.37
SCAMP2-204ENST00000563829 FAM47BQ8NA70 645 aa12.71□□□□□ -0.37
SCAMP2-204ENST00000563829 ATP6V1E2Q96A05 226 aa12.71□□□□□ -0.37
SCAMP2-204ENST00000563829 HESX1Q9UBX0 185 aa12.71□□□□□ -0.37
SCAMP2-204ENST00000563829 NR2E3Q9Y5X4 410 aa12.71□□□□□ -0.37
SCAMP2-204ENST00000563829 PLIN4Q96Q06 1357 aa12.71□□□□□ -0.37
SCAMP2-204ENST00000563829 HMX2A2RU54 273 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 NEMP1O14524 444 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 ARP10275 920 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 GMPRP36959 345 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 CEACAM7Q14002 265 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 WDR44Q5JSH3 913 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 NIPAL1Q6NVV3 410 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 DARS2Q6PI48 645 aaKnown RBP12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 SETD3Q86TU7 594 aaPredicted RBP12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 RFX6Q8HWS3 928 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 ZNF786Q8N393 782 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 UBR7Q8N806 425 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 KYQ8NBH2 561 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 TBC1D15Q8TC07 691 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 AGAP3Q96P47 875 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 SLC4A5Q9BY07 1137 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 TRPV6Q9H1D0 765 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 HIPK3Q9H422 1215 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 STN1Q9H668 368 aaKnown RBP12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 COG4Q9H9E3 785 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 CLK4Q9HAZ1 481 aaKnown RBP12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 VPS45Q9NRW7 570 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 SLC9A2Q9UBY0 812 aa12.71□□□□□ -0.38
SCAMP2-204ENST00000563829 LOC102724428A0A0B4J2F2 783 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 GOLGA8TH3BQL2 631 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 CNOT3O75175 753 aaKnown RBP12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 SPAG6O75602 509 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 C1QAP02745 245 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 SHMT1P34896 483 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 CLCN2P51788 898 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 BMXP51813 675 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 SIK1P57059 783 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 GNA12Q03113 381 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 RWDD4Q6NW29 188 aaKnown RBP12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 KCTD17Q8N5Z5 321 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 TMEM102Q8N9M5 508 aaPredicted RBP12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 SPATA18Q8TC71 538 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 STARD8Q92502 1023 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 CIB1Q99828 191 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 DDX4Q9NQI0 724 aaKnown RBP12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 PNPLA3Q9NST1 481 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 SACM1LQ9NTJ5 587 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 SRP68Q9UHB9 627 aaKnown RBP12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 ROBO1Q9Y6N7 1651 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 WDR64B1ANS9 1081 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 KDM1AO60341 852 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 ZC3H11AO75152 810 aaKnown RBP eCLIP12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 GSRP00390 522 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 AMHP03971 560 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 MCF2P10911 925 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 RCVRNP35243 200 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 RAB15P59190 212 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 YWHAZP63104 245 aaKnown RBP12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 DMPKQ09013 629 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 RGS21Q2M5E4 152 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 SLC9B1Q4ZJI4 515 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 CYP4A22Q5TCH4 519 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 DCLRE1AQ6PJP8 1040 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 NPNTQ6UXI9 565 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 ENOSF1Q7L5Y1 443 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 FIBCD1Q8N539 461 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 LRTOMTQ8WZ04 291 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 ARHGEF1Q92888 912 aaKnown RBP12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 CDK5RAP2Q96SN8 1893 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 SORT1Q99523 831 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 CALN1Q9BXU9 219 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 TPK1Q9H3S4 243 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 CXorf21Q9HAI6 301 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 GID8Q9NWU2 228 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 DNAJC28Q9NX36 388 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 PCSK1NQ9UHG2 260 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 VPS51Q9UID3 782 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 GIT1Q9Y2X7 761 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 CORINQ9Y5Q5 1042 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 SNX13Q9Y5W8 968 aa12.7□□□□□ -0.38
SCAMP2-204ENST00000563829 PRSS51A0A1B0GVH4 220 aa12.69□□□□□ -0.38
SCAMP2-204ENST00000563829 ENTPD3O75355 529 aa12.69□□□□□ -0.38
SCAMP2-204ENST00000563829 TNNI1P19237 187 aa12.69□□□□□ -0.38
SCAMP2-204ENST00000563829 SLC10A2Q12908 348 aaPredicted RBP12.69□□□□□ -0.38
SCAMP2-204ENST00000563829 SLC9A4Q6AI14 798 aa12.69□□□□□ -0.38
SCAMP2-204ENST00000563829 C16orf89Q6UX73 402 aa12.69□□□□□ -0.38
SCAMP2-204ENST00000563829 PHF13Q86YI8 300 aaPredicted RBP12.69□□□□□ -0.38
SCAMP2-204ENST00000563829 TMEM126BQ8IUX1 230 aa12.69□□□□□ -0.38
SCAMP2-204ENST00000563829 CHPT1Q8WUD6 406 aa12.69□□□□□ -0.38
SCAMP2-204ENST00000563829 LRRN4Q8WUT4 740 aa12.69□□□□□ -0.38
SCAMP2-204ENST00000563829 RCN3Q96D15 328 aa12.69□□□□□ -0.38
SCAMP2-204ENST00000563829 TMA16Q96EY4 203 aaKnown RBP12.69□□□□□ -0.38
SCAMP2-204ENST00000563829 SLC29A1Q99808 456 aa12.69□□□□□ -0.38
SCAMP2-204ENST00000563829 FERMT1Q9BQL6 677 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms