RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ENC1O14682 589 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 EIF3DO15371 548 aaKnown RBP eCLIP10.88□□□□□ -0.675e-6■□□□□ 9.5
SF3B3-204ENST00000563739 BRINP1O60477 761 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 SEMA4FO95754 770 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 EPHX1P07099 455 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 TNNI1P19237 187 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 CD27P26842 260 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 CASP1P29466 404 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 CORO1AP31146 461 aaKnown RBP10.88□□□□□ -0.67
SF3B3-204ENST00000563739 ATICP31939 592 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 DLG4P78352 724 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 SEMG2Q02383 582 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 EIF4HQ15056 248 aaKnown RBP10.88□□□□□ -0.67
SF3B3-204ENST00000563739 BMT2Q1RMZ1 405 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 ZNF699Q32M78 642 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 SFMBT2Q5VUG0 894 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 CCDC186Q7Z3E2 898 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 ADIPOR2Q86V24 386 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 C12orf56Q8IXR9 622 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 ZNF276Q8N554 614 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 CYB5D2Q8WUJ1 264 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 JAKMIP2Q96AA8 810 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 LMLNQ96KR4 655 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 PANK2Q9BZ23 570 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 APOBEC3GQ9HC16 384 aaKnown RBP10.88□□□□□ -0.67
SF3B3-204ENST00000563739 PRSS16Q9NQE7 514 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 KBTBD4Q9NVX7 518 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 FTSJ1Q9UET6 329 aa10.88□□□□□ -0.67
SF3B3-204ENST00000563739 LSM7Q9UK45 103 aaKnown RBP10.88□□□□□ -0.67
SF3B3-204ENST00000563739 MORC2Q9Y6X9 1032 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-204ENST00000563739 H3BQV1 296 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 NPC1O15118 1278 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 VILLO15195 856 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 RFPL3O75679 317 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 ADORA2BP29275 332 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 PLA2G4AP47712 749 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 CFHR1Q03591 330 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 INCA1Q0VD86 236 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 C10orf120Q5SQS8 335 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 CNNM4Q6P4Q7 775 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 FMNL3Q8IVF7 1028 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 SPACA3Q8IXA5 215 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 NELFCDQ8IXH7 590 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 CPXM2Q8N436 756 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.87□□□□□ -0.67
SF3B3-204ENST00000563739 XXYLT1Q8NBI6 393 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 PARD3BQ8TEW8 1205 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 RFFLQ8WZ73 363 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 SYAP1Q96A49 352 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-204ENST00000563739 NRSN2Q9GZP1 204 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 NACA2Q9H009 215 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 FBXO44Q9H4M3 255 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 KIAA1586Q9HCI6 787 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.87□□□□□ -0.671e-10■■■■■ 67.3
SF3B3-204ENST00000563739 FLNCQ14315 2725 aa10.87□□□□□ -0.67
SF3B3-204ENST00000563739 SPENQ96T58 3664 aaKnown RBP10.87□□□□□ -0.67
SF3B3-204ENST00000563739 TEX51A0A1B0GUA7 166 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 J3QKU1 62 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 ZBTB24O43167 697 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-204ENST00000563739 FSBPO95073 299 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 HMBSP08397 361 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 PRR29P0C7W0 189 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 FAM200BP0CF97 657 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 EPHA8P29322 1005 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-204ENST00000563739 STAT6P42226 847 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 NCOA4Q13772 614 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 ZACNQ401N2 412 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 ZNF667Q5HYK9 610 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 SERPINA13PQ6UXR4 307 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 ZNF605Q86T29 641 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 PDILTQ8N807 584 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 TTC9Q92623 222 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 MYEOVQ96EZ4 313 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 CNDP2Q96KP4 475 aaKnown RBP10.86□□□□□ -0.67
SF3B3-204ENST00000563739 TNIP3Q96KP6 325 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 USP28Q96RU2 1077 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 ELF4Q99607 663 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-204ENST00000563739 CIPCQ9C0C6 399 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 UPF2Q9HAU5 1272 aaKnown RBP10.86□□□□□ -0.67
SF3B3-204ENST00000563739 PNPLA8Q9NP80 782 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 DMAC2Q9NW81 257 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 CCDC39Q9UFE4 941 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 RASAL2Q9UJF2 1139 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 KIF3AQ9Y496 699 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 PCDHA5Q9Y5H7 936 aa10.86□□□□□ -0.67
SF3B3-204ENST00000563739 UBE4BO95155 1302 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 A0A1W2PNU3 283 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-204ENST00000563739 A0A1W2PPC4 97 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 SYNCRIPO60506 623 aaKnown RBP10.85□□□□□ -0.67
SF3B3-204ENST00000563739 ASS1P00966 412 aaKnown RBP10.85□□□□□ -0.67
SF3B3-204ENST00000563739 KRT10P13645 584 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 INSM1Q01101 510 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-204ENST00000563739 EFEMP1Q12805 493 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 BNIP3Q12983 259 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 SUZ12Q15022 739 aaKnown RBP10.85□□□□□ -0.67
SF3B3-204ENST00000563739 FAM26FQ5R3K3 315 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 KIAA0895LQ68EN5 471 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 CCDC73Q6ZRK6 1079 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 GPR155Q7Z3F1 870 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 SPATS2Q86XZ4 545 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms