RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 PCDHAC1Q9H158 963 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 MSRB1Q9NZV6 116 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 MYO1AQ9UBC5 1043 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 ZMYND8Q9ULU4 1186 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 LRP12Q9Y561 859 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 TRBV5-3A0A0A0MS03 114 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 A0A0G2JK05 382 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 FAM90A8PA6NJQ4 464 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 NDUFB8O95169 186 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 NDST3O95803 873 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 FAM90A13PP0C7W8 464 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 FAM90A24PP0C7X0 464 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 SLC5A1P13866 664 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 PECAM1P16284 738 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 TFEBP19484 476 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 GABRB3P28472 473 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 IL6STP40189 918 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 ZNF84P51523 738 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 SEMA3BQ13214 749 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 ATP1A4Q13733 1029 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 MANEAQ5SRI9 462 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 DAB2IPQ5VWQ8 1189 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 CCDC144NLQ6NUI1 221 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 BEND5Q7L4P6 421 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 ADGRF4Q8IZF3 695 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 CCDC150Q8NCX0 1101 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 ACRBPQ8NEB7 543 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 OR52L2PQ8NGH6 319 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 GJA10Q969M2 543 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 GRAMD1AQ96CP6 724 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 ZNF845Q96IR2 970 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 TUBB6Q9BUF5 446 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 TTLL2Q9BWV7 592 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 CDCP1Q9H5V8 836 aa3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 PAPOLBQ9NRJ5 636 aaKnown RBP3.85□□□□□ -1.79
HMGB1P33-201ENST00000563485 TMEM272A0A1B0GTI8 110 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 OR2W5A6NFC9 320 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 M0QZQ0 153 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 APOL1O14791 398 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 CTIFO43310 598 aaKnown RBP3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 SMAD6O43541 496 aaKnown RBP3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 EPN2O95208 641 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 CBSLP0DN79 551 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 MMP8P22894 467 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 CBSP35520 551 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 STAT6P42226 847 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 GSTM5P46439 218 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 STT3AP46977 705 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 AGTR2P50052 363 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 DMWDQ09019 674 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 SLC5A9Q2M3M2 681 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 PRTGQ2VWP7 1150 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 P3H1Q32P28 736 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 ODF3L2Q3SX64 289 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 KIAA1161Q6NSJ0 714 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 ACSM6Q6P461 480 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 TLDC1Q6P9B6 456 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 DHRS13Q6UX07 377 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 PIK3AP1Q6ZUJ8 805 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 RFX8Q6ZV50 586 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 RHPN2Q8IUC4 686 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 SLC44A5Q8NCS7 719 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 ASB12Q8WXK4 309 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 OVCA2Q8WZ82 227 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 MSI2Q96DH6 328 aaKnown RBP3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 LYZL4Q96KX0 146 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 SNX27Q96L92 541 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 TBCBQ99426 244 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 EIF3CQ99613 913 aaKnown RBP3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 PIMREGQ9BSJ6 248 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 ELOVL1Q9BW60 279 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 MLXIPQ9HAP2 919 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 RXFP3Q9NSD7 469 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 PCDHA12Q9UN75 941 aa3.84□□□□□ -1.79
HMGB1P33-201ENST00000563485 SYF2O95926 243 aaKnown RBP3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 AKR1A1P14550 325 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 EGR1P18146 543 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 SLC8A1P32418 973 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 ALDH7A1P49419 539 aaKnown RBP3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 PMS2P11Q13670 270 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 SEMA3AQ14563 771 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 PGM5Q15124 567 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 INPP5JQ15735 1006 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 LVRNQ6Q4G3 990 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 C16orf89Q6UX73 402 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 LAS2Q8IYD9 372 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 ARL14EPQ8N8R7 260 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 GLIS1Q8NBF1 620 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 GLMPQ8WWB7 406 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 ASB5Q8WWX0 329 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 GDF15Q99988 308 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 COLEC11Q9BWP8 271 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 HIPK2Q9H2X6 1198 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 DECR2Q9NUI1 292 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 AGO2Q9UKV8 859 aaKnown RBP3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 MAN2B2Q9Y2E5 1009 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 SPATA31A5Q5VU36 1347 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 EMSYQ7Z589 1322 aa3.83□□□□□ -1.8
HMGB1P33-201ENST00000563485 SPATA31A7Q8IWB4 1347 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms