RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 TBC1D4O60343 1298 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 CST8O60676 142 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 EFEMP2O95967 443 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 ITGAVP06756 1048 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 KRT10P13645 584 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 CYP2F1P24903 491 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 TNNT3P45378 269 aaPredicted RBP10.07□□□□□ -0.8
UBFD1-202ENST00000563366 TUFMP49411 452 aaKnown RBP10.07□□□□□ -0.8
UBFD1-202ENST00000563366 GLUD2P49448 558 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 NDUFV1P49821 464 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 CACNA2D1P54289 1103 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 YWHAGP61981 247 aaKnown RBP eCLIP10.07□□□□□ -0.8
UBFD1-202ENST00000563366 RBM10P98175 930 aaKnown RBP10.07□□□□□ -0.8
UBFD1-202ENST00000563366 KRT17Q04695 432 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 SCAPQ12770 1279 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 PTK6Q13882 451 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 DPYSL3Q14195 570 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 PSMD5Q16401 504 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 ACBD5Q5T8D3 534 aaPredicted RBP10.07□□□□□ -0.8
UBFD1-202ENST00000563366 BTBD8Q5XKL5 378 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 TPGS2Q68CL5 300 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 DUPD1Q68J44 220 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 TXNRD3NBQ6F5E7 133 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 CYP4V2Q6ZWL3 525 aaPredicted RBP10.07□□□□□ -0.8
UBFD1-202ENST00000563366 BZW1Q7L1Q6 419 aaKnown RBP10.07□□□□□ -0.8
UBFD1-202ENST00000563366 GSTA5Q7RTV2 222 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 GPRIN1Q7Z2K8 1008 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 BNIPLQ7Z465 357 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 UBE2Q1Q7Z7E8 422 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 MON1AQ86VX9 555 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 RFX6Q8HWS3 928 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 SCN4BQ8IWT1 228 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 AENQ8WTP8 325 aaKnown RBP10.07□□□□□ -0.8
UBFD1-202ENST00000563366 RNF139Q8WU17 664 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 IFT81Q8WYA0 676 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 P3H4Q92791 437 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 LRRC45Q96CN5 670 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 SPATA17Q96L03 361 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 RNF157Q96PX1 679 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 PEBP4Q96S96 227 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 CDK5RAP1Q96SZ6 601 aaKnown RBP10.07□□□□□ -0.8
UBFD1-202ENST00000563366 ZNF395Q9H8N7 513 aaPredicted RBP10.07□□□□□ -0.8
UBFD1-202ENST00000563366 FAM204AQ9H8W3 233 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.07□□□□□ -0.8
UBFD1-202ENST00000563366 CHST7Q9NS84 486 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 OLA1Q9NTK5 396 aaKnown RBP10.07□□□□□ -0.8
UBFD1-202ENST00000563366 TMEM30AQ9NV96 361 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 SPG21Q9NZD8 308 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 MAFFQ9ULX9 164 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 SCML2Q9UQR0 700 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 NR2E1Q9Y466 385 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 PCDHB12Q9Y5F1 795 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 MTMR11A4FU01 709 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 CFAP69A5D8W1 941 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 NT5C1B-RDH14C9J2C7 533 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 H3BRJ5 948 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 FGBP02675 491 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 URODP06132 367 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 HTR7P34969 479 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 NR2C2P49116 596 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 ARSEP51690 589 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 VCPP55072 806 aaKnown RBP10.06□□□□□ -0.8
UBFD1-202ENST00000563366 DEFB103AP81534 67 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 MTMR3Q13615 1198 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 BRMS1LQ5PSV4 323 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 RTP2Q5QGT7 225 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 SH3PXD2AQ5TCZ1 1133 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 BSPRYQ5W0U4 402 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 TTC27Q6P3X3 843 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 DENND5BQ6ZUT9 1274 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 ZDHHC14Q8IZN3 488 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 SLC39A11Q8N1S5 342 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 MREGQ8N565 214 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 COLGALT1Q8NBJ5 622 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 PDZD8Q8NEN9 1154 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 SLC7A14Q8TBB6 771 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 C1orf54Q8WWF1 131 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 CASKIN2Q8WXE0 1202 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 ACSF2Q96CM8 615 aaPredicted RBP10.06□□□□□ -0.8
UBFD1-202ENST00000563366 FAF2Q96CS3 445 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 VWCEQ96DN2 955 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 SNF8Q96H20 258 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 SERPINB11Q96P15 392 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 FMO2Q99518 471 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 FERMT1Q9BQL6 677 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 HTATIP2Q9BUP3 242 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 HERC2P3Q9BVR0 1158 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 RHOBTB2Q9BYZ6 727 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 MCOLN1Q9GZU1 580 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 SMOC2Q9H3U7 446 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 DHX35Q9H5Z1 703 aaKnown RBP10.06□□□□□ -0.8
UBFD1-202ENST00000563366 PCDH18Q9HCL0 1135 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 DDIT4Q9NX09 232 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 CLIC5Q9NZA1 410 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 SCHIP1Q9P0W5 487 aaPredicted RBP10.06□□□□□ -0.8
UBFD1-202ENST00000563366 WHRNQ9P202 907 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 ASIC3Q9UHC3 531 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 FZD10Q9ULW2 581 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 NFU1Q9UMS0 254 aa10.06□□□□□ -0.8
UBFD1-202ENST00000563366 ZNF148Q9UQR1 794 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms