RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 URODP06132 367 aa18.68■□□□□ 0.58
COMMD4-208ENST00000563220 DNAJB2P25686 324 aa18.68■□□□□ 0.58
COMMD4-208ENST00000563220 DHX9Q08211 1270 aaKnown RBP18.68■□□□□ 0.58
COMMD4-208ENST00000563220 UAP1Q16222 522 aaPredicted RBP18.68■□□□□ 0.58
COMMD4-208ENST00000563220 P3H1Q32P28 736 aa18.68■□□□□ 0.58
COMMD4-208ENST00000563220 FAM182AQ5T1J6 154 aa18.68■□□□□ 0.58
COMMD4-208ENST00000563220 CCHCR1Q8TD31 782 aa18.68■□□□□ 0.58
COMMD4-208ENST00000563220 ZBED2Q9BTP6 218 aa18.68■□□□□ 0.58
COMMD4-208ENST00000563220 USP29Q9HBJ7 922 aa18.68■□□□□ 0.58
COMMD4-208ENST00000563220 AAASQ9NRG9 546 aa18.68■□□□□ 0.58
COMMD4-208ENST00000563220 INSL6Q9Y581 213 aa18.68■□□□□ 0.58
COMMD4-208ENST00000563220 PCDHB12Q9Y5F1 795 aa18.68■□□□□ 0.58
COMMD4-208ENST00000563220 PTPRSQ13332 1948 aa18.68■□□□□ 0.58
COMMD4-208ENST00000563220 AGPSO00116 658 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 FGF18O76093 207 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 RARGP13631 454 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 PPM1AP35813 382 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 GGCXP38435 758 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 GPS1Q13098 491 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 IZUMO3Q5VZ72 239 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 TPGS2Q68CL5 300 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 MSANTD2Q6P1R3 559 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 CCDC33Q8N5R6 958 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 LRRC45Q96CN5 670 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 FAM129AQ9BZQ8 928 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.67■□□□□ 0.58
COMMD4-208ENST00000563220 CLIC5Q9NZA1 410 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 DTLQ9NZJ0 730 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 OR12D3Q9UGF7 316 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 ANAPC5Q9UJX4 755 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 MAGED2Q9UNF1 606 aaPredicted RBP18.67■□□□□ 0.58
COMMD4-208ENST00000563220 DCLK1O15075 740 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 LILRB3O75022 631 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 PPFIA2O75334 1257 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 ZDHHC11BP0C7U3 371 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 STIP1P31948 543 aaKnown RBP18.67■□□□□ 0.58
COMMD4-208ENST00000563220 RPL22P35268 128 aaKnown RBP18.67■□□□□ 0.58
COMMD4-208ENST00000563220 HSD17B3P37058 310 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 NR2C2P49116 596 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 RAB33AQ14088 237 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 BRMS1LQ5PSV4 323 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 PSRC1Q6PGN9 363 aaPredicted RBP18.67■□□□□ 0.58
COMMD4-208ENST00000563220 IQCKQ8N0W5 287 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 NETO2Q8NC67 525 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 CLP1Q92989 425 aaKnown RBP18.67■□□□□ 0.58
COMMD4-208ENST00000563220 TTLL2Q9BWV7 592 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 OSBPL2Q9H1P3 480 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 CYP4F11Q9HBI6 524 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 TLR8Q9NR97 1041 aaKnown RBP18.67■□□□□ 0.58
COMMD4-208ENST00000563220 MTRF1LQ9UGC7 380 aaKnown RBP18.67■□□□□ 0.58
COMMD4-208ENST00000563220 ATP8A1Q9Y2Q0 1164 aa18.67■□□□□ 0.58
COMMD4-208ENST00000563220 ALPK3Q96L96 1907 aa18.66■□□□□ 0.58
COMMD4-208ENST00000563220 DNALI1O14645 258 aaPredicted RBP18.66■□□□□ 0.58
COMMD4-208ENST00000563220 ERCC2P18074 760 aa18.66■□□□□ 0.58
COMMD4-208ENST00000563220 RBL1P28749 1068 aa18.66■□□□□ 0.58
COMMD4-208ENST00000563220 CCR1P32246 355 aa18.66■□□□□ 0.58
COMMD4-208ENST00000563220 CHKAP35790 457 aa18.66■□□□□ 0.58
COMMD4-208ENST00000563220 HCAR3P49019 387 aa18.66■□□□□ 0.58
COMMD4-208ENST00000563220 HIBCHQ6NVY1 386 aaPredicted RBP18.66■□□□□ 0.58
COMMD4-208ENST00000563220 HERC6Q8IVU3 1022 aa18.66■□□□□ 0.58
COMMD4-208ENST00000563220 HERVK_113Q902F9 699 aa18.66■□□□□ 0.58
COMMD4-208ENST00000563220 SERPINB11Q96P15 392 aa18.66■□□□□ 0.58
COMMD4-208ENST00000563220 PRDM16Q9HAZ2 1276 aa18.66■□□□□ 0.58
COMMD4-208ENST00000563220 MRPL17Q9NRX2 175 aaKnown RBP18.66■□□□□ 0.58
COMMD4-208ENST00000563220 HSFX1Q9UBD0 423 aa18.66■□□□□ 0.58
COMMD4-208ENST00000563220 BCLAF3A2AJT9 711 aaKnown RBP18.65■□□□□ 0.58
COMMD4-208ENST00000563220 KCNU1A8MYU2 1149 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 MFSD11O43934 449 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 LRIG2O94898 1065 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 PSEN1P49768 467 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 TPI1P60174 286 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 EFEMP1Q12805 493 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 PPP2R5DQ14738 602 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 KLHL23Q8NBE8 558 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 BBOF1Q8ND07 529 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 SLC39A13Q96H72 371 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 CEP295NLQ96MC4 621 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 PWWP2AQ96N64 755 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 ZIM3Q96PE6 472 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 HAPLN3Q96S86 360 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 ZBP1Q9H171 429 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 XPO7Q9UIA9 1087 aaKnown RBP18.65■□□□□ 0.58
COMMD4-208ENST00000563220 ZMYND8Q9ULU4 1186 aaPredicted RBP18.65■□□□□ 0.58
COMMD4-208ENST00000563220 TPX2Q9ULW0 747 aaKnown RBP18.65■□□□□ 0.58
COMMD4-208ENST00000563220 LCHNA4D1U4 455 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 H3BQF6 201 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 TEX28O15482 410 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 PAGE1O75459 146 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 CAV1Q03135 178 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 XRCC4Q13426 336 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 PAFAH1B3Q15102 231 aaKnown RBP18.65■□□□□ 0.58
COMMD4-208ENST00000563220 ARTNQ5T4W7 220 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 ALS2CLQ60I27 953 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 ZNF771Q7L3S4 317 aaPredicted RBP18.65■□□□□ 0.58
COMMD4-208ENST00000563220 TP53INP2Q8IXH6 220 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 OLFM3Q96PB7 478 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 RAD9AQ99638 391 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 SIK2Q9H0K1 926 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 TLR6Q9Y2C9 796 aa18.65■□□□□ 0.58
COMMD4-208ENST00000563220 SLC4A7Q9Y6M7 1214 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms