RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 KDM7AQ6ZMT4 941 aa17.13■□□□□ 0.33
PKD1-225ENST00000562297 CCDC33Q8N5R6 958 aa17.13■□□□□ 0.33
PKD1-225ENST00000562297 EPS8L3Q8TE67 593 aaKnown RBP17.13■□□□□ 0.33
PKD1-225ENST00000562297 TKTL2Q9H0I9 626 aa17.13■□□□□ 0.33
PKD1-225ENST00000562297 WDCPQ9H6R7 721 aa17.13■□□□□ 0.33
PKD1-225ENST00000562297 IL37Q9NZH6 218 aa17.13■□□□□ 0.33
PKD1-225ENST00000562297 SCML2Q9UQR0 700 aa17.13■□□□□ 0.33
PKD1-225ENST00000562297 E7ESA3 106 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 GOLGA8MH3BSY2 632 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 SMAPO00193 183 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 TRIM66O15016 1216 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 IRAK2O43187 625 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 GPR17Q13304 367 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 IKBKEQ14164 716 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 HIF1AQ16665 826 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 MSS51Q4VC12 460 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 DNAJC21Q5F1R6 531 aaKnown RBP17.12■□□□□ 0.33
PKD1-225ENST00000562297 TNFAIP8L3Q5GJ75 292 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 NUP93Q8N1F7 819 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 ARMC5Q96C12 935 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 ROPN1BQ9BZX4 212 aaPredicted RBP17.12■□□□□ 0.33
PKD1-225ENST00000562297 CRISPLD1Q9H336 500 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 SMOC2Q9H3U7 446 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 CWH43Q9H720 699 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 ROPN1Q9HAT0 212 aaPredicted RBP17.12■□□□□ 0.33
PKD1-225ENST00000562297 TMEM39AQ9NV64 488 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 OSER1Q9NX31 292 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 PAK5Q9P286 719 aa17.12■□□□□ 0.33
PKD1-225ENST00000562297 SHOX2O60902 331 aaPredicted RBP17.11■□□□□ 0.33
PKD1-225ENST00000562297 GCATO75600 419 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 UPP2O95045 317 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 ABHD2P08910 425 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 CAPN2P17655 700 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 GJA8P48165 433 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 USP46P62068 366 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 BASP1P80723 227 aaKnown RBP17.11■□□□□ 0.33
PKD1-225ENST00000562297 ARL13BQ3SXY8 428 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 FNBP1LQ5T0N5 605 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 BTBD8Q5XKL5 378 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 MFSD5Q6N075 450 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 FBXO46Q6PJ61 603 aaPredicted RBP17.11■□□□□ 0.33
PKD1-225ENST00000562297 WDR83Q9BRX9 315 aaKnown RBP17.11■□□□□ 0.33
PKD1-225ENST00000562297 NOVA2Q9UNW9 492 aaKnown RBP17.11■□□□□ 0.33
PKD1-225ENST00000562297 SHROOM3Q8TF72 1996 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 A0A1W2PQH9 124 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 FAM92AA1XBS5 289 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 MTMR11A4FU01 709 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 HACD1B0YJ81 288 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 BANF1O75531 89 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 TCEA3O75764 348 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 VAV1P15498 845 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 MAGEA6P43360 314 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 HNRNPH2P55795 449 aaKnown RBP17.11■□□□□ 0.33
PKD1-225ENST00000562297 PRKD1Q15139 912 aaPredicted RBP17.11■□□□□ 0.33
PKD1-225ENST00000562297 C6orf118Q5T5N4 469 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 CENPUQ71F23 418 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 CROCCP2Q86T23 111 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 RNF168Q8IYW5 571 aaPredicted RBP17.11■□□□□ 0.33
PKD1-225ENST00000562297 CCDC110Q8TBZ0 833 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 CASP10Q92851 521 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 LGMNQ99538 433 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 TTPALQ9BTX7 342 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 VN1R3Q9BXE9 311 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 ARHGEF38Q9NXL2 777 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 BCCIPQ9P287 314 aaKnown RBP eCLIP17.11■□□□□ 0.33
PKD1-225ENST00000562297 SNX10Q9Y5X0 201 aa17.11■□□□□ 0.33
PKD1-225ENST00000562297 C5orf60A6NFR6 353 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 RASGRF2O14827 1237 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 CHADO15335 359 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 CLTBP09497 229 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 ERCC2P18074 760 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 PDIA2Q13087 525 aaKnown RBP17.1■□□□□ 0.33
PKD1-225ENST00000562297 CBLBQ13191 982 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 AUHQ13825 339 aaKnown RBP17.1■□□□□ 0.33
PKD1-225ENST00000562297 LRRC26Q2I0M4 334 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 ARTNQ5T4W7 220 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 RNF19BQ6ZMZ0 732 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 ANKS3Q6ZW76 656 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 MON1AQ86VX9 555 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 NETO2Q8NC67 525 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 RAB6BQ9NRW1 208 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 OR12D3Q9UGF7 316 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 XPO7Q9UIA9 1087 aaKnown RBP17.1■□□□□ 0.33
PKD1-225ENST00000562297 NEU3Q9UQ49 428 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 PTPRSQ13332 1948 aa17.1■□□□□ 0.33
PKD1-225ENST00000562297 TLDC2A0PJX2 215 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 SOAT2O75908 522 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 CPB1P15086 417 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 ITGB8P26012 769 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 RFC2P35250 354 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 ACTN2P35609 894 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 SLCO1A2P46721 670 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 ZNF135P52742 658 aaPredicted RBP17.09■□□□□ 0.33
PKD1-225ENST00000562297 TPI1P60174 286 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 MAGOHP61326 146 aaKnown RBP17.09■□□□□ 0.33
PKD1-225ENST00000562297 LONRF1Q17RB8 773 aa17.09■□□□□ 0.33
PKD1-225ENST00000562297 HP1BP3Q5SSJ5 553 aaPredicted RBP17.09■□□□□ 0.33
PKD1-225ENST00000562297 PRSS55Q6UWB4 352 aaPredicted RBP17.09■□□□□ 0.33
PKD1-225ENST00000562297 BZW1Q7L1Q6 419 aaKnown RBP17.09■□□□□ 0.33
PKD1-225ENST00000562297 TP53INP2Q8IXH6 220 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms