RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 L1CAMP32004 1257 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 ICAM3P32942 547 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 MAGEA3P43357 314 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 GBE1Q04446 702 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 TBL3Q12788 808 aaKnown RBP14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 PDK3Q15120 406 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 DBN1Q16643 649 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 SLC5A9Q2M3M2 681 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 BSPRYQ5W0U4 402 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 SLC9A4Q6AI14 798 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 ZNF280CQ8ND82 737 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 ICA1LQ8NDH6 482 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 B4GALNT2Q8NHY0 566 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 CLMNQ96JQ2 1002 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 XPNPEP3Q9NQH7 507 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 PIH1D1Q9NWS0 290 aaKnown RBP14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 E2F8A0AVK6 867 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 FARP2O94887 1054 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 GJB1P08034 283 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 DESP17661 470 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 TPSB2P20231 275 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 CXCL9Q07325 125 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 PCLAFQ15004 111 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 TPSAB1Q15661 275 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 MAP3K21Q5TCX8 1036 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 PGM2L1Q6PCE3 622 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 C4orf22Q6V702 233 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 MAVSQ7Z434 540 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 JDP2Q8WYK2 163 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 NCSTNQ92542 709 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 EZH1Q92800 747 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 MIS12Q9H081 205 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 C2orf40Q9H1Z8 148 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 FAM96AQ9H5X1 160 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 NRDE2Q9H7Z3 1164 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 AS3MTQ9HBK9 375 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 PICK1Q9NRD5 415 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 MOCS1Q9NZB8 636 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 DCDC2Q9UHG0 476 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 TSPAN16Q9UKR8 245 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 AFG3L2Q9Y4W6 797 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 A6NJR5 290 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 DCXO43602 365 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 IL18RAPO95256 599 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 P4HA1P13674 534 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 ITGAXP20702 1163 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 SESN2P58004 480 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 LRRC23Q53EV4 343 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 MAP1SQ66K74 1059 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 JADE1Q6IE81 842 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 PACS1Q6VY07 963 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 TSHZ1Q6ZSZ6 1077 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 EEPD1Q7L9B9 569 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 SDCCAG8Q86SQ7 713 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 ACMSDQ8TDX5 336 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 NAT14Q8WUY8 206 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 TXNDC16Q9P2K2 825 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 NR2E3Q9Y5X4 410 aa14.39□□□□□ -0.11
VPS9D1-202ENST00000561976 LACTBL1A8MY62 500 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 ACKR2O00590 384 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 GCATO75600 419 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 STK10O94804 968 aaKnown RBP14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 EGFRP00533 1210 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 PABPC4LP0CB38 370 aaKnown RBP14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 GRK2P25098 689 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 GRIA2P42262 883 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 NDST1P52848 882 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 XIAPP98170 497 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 STXBP5Q5T5C0 1151 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 HEATR6Q6AI08 1181 aaKnown RBP14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 FRMD7Q6ZUT3 714 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 SATL1Q86VE3 508 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 OPTNQ96CV9 577 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 DTNBP1Q96EV8 351 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 GCNAQ96QF7 691 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 CDT1Q9H211 546 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 DHX35Q9H5Z1 703 aaKnown RBP14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 DNAJC28Q9NX36 388 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 COL11A1P12107 1806 aaPredicted RBP14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 PSME4Q14997 1843 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 RALBP11234 206 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 CHN2P52757 468 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 ITGA9Q13797 1035 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 PPM1JQ5JR12 505 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 NBPF12Q5TAG4 269 aaPredicted RBP14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 KCNT2Q6UVM3 1135 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 TRIM50Q86XT4 487 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 PHTF2Q8N3S3 785 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 FBXW8Q8N3Y1 598 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 SEPT1Q8WYJ6 367 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 SORT1Q99523 831 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 ZNF670Q9BS34 389 aa14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 UBE2OQ9C0C9 1292 aaKnown RBP14.38□□□□□ -0.11
VPS9D1-202ENST00000561976 COL4A5P29400 1685 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 SF3B1O75533 1304 aaKnown RBP eCLIP14.37□□□□□ -0.116e-8■■■■■ 80.2
VPS9D1-202ENST00000561976 PGM3O95394 542 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 MYL4P12829 197 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 CYP3A5P20815 502 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 PROZP22891 400 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 TYK2P29597 1187 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms