RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 CNTN3Q9P232 1028 aa11.33□□□□□ -0.6
NEIL1-202ENST00000561643 FAM237BA0A1B0GVD1 139 aa11.33□□□□□ -0.6
NEIL1-202ENST00000561643 PPEF2O14830 753 aa11.33□□□□□ -0.6
NEIL1-202ENST00000561643 DDNO94850 711 aaPredicted RBP11.33□□□□□ -0.6
NEIL1-202ENST00000561643 C1QAP02745 245 aa11.33□□□□□ -0.6
NEIL1-202ENST00000561643 ESRRAP11474 423 aaPredicted RBP11.33□□□□□ -0.6
NEIL1-202ENST00000561643 YBX3P16989 372 aaKnown RBP eCLIP11.33□□□□□ -0.6
NEIL1-202ENST00000561643 TFE3P19532 575 aaPredicted RBP11.33□□□□□ -0.6
NEIL1-202ENST00000561643 PRKCHP24723 683 aa11.33□□□□□ -0.6
NEIL1-202ENST00000561643 DEUP1Q05D60 604 aa11.33□□□□□ -0.6
NEIL1-202ENST00000561643 DSTYKQ6XUX3 929 aa11.33□□□□□ -0.6
NEIL1-202ENST00000561643 TMEM110Q86TL2 294 aa11.33□□□□□ -0.6
NEIL1-202ENST00000561643 OXNAD1Q96HP4 312 aaPredicted RBP11.33□□□□□ -0.6
NEIL1-202ENST00000561643 TLE6Q9H808 572 aa11.33□□□□□ -0.6
NEIL1-202ENST00000561643 SMYD2Q9NRG4 433 aa11.33□□□□□ -0.6
NEIL1-202ENST00000561643 PLLPQ9Y342 182 aa11.33□□□□□ -0.6
NEIL1-202ENST00000561643 MAGEA13PA6NCF6 341 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 CAPN9O14815 690 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 METTL18O95568 372 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 CSH1P0DML2 217 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 CSH2P0DML3 217 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 ERFP50548 548 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 ATXN1P54253 815 aaKnown RBP11.32□□□□□ -0.6
NEIL1-202ENST00000561643 INHBCP55103 352 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 MROH9Q5TGP6 573 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 TRMT10BQ6PF06 316 aaKnown RBP11.32□□□□□ -0.6
NEIL1-202ENST00000561643 TTC7BQ86TV6 843 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 LINC01465Q8N7H1 131 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 SLC35F5Q8WV83 523 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 USP6NLQ92738 828 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.6
NEIL1-202ENST00000561643 LRRC39Q96DD0 335 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 PTCD3Q96EY7 689 aaKnown RBP11.32□□□□□ -0.6
NEIL1-202ENST00000561643 VCX3BQ9H321 246 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 FAM124BQ9H5Z6 455 aaPredicted RBP11.32□□□□□ -0.6
NEIL1-202ENST00000561643 VCX3AQ9NNX9 186 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 FCHO1O14526 889 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 DNAJC6O75061 913 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 BST1Q10588 318 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 CHI3L2Q15782 390 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 PKDCCQ504Y2 493 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 GLRA4Q5JXX5 417 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 ATG16L1Q676U5 607 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 C4orf50Q6ZRC1 276 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 NUDCD3Q8IVD9 361 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 MCUQ8NE86 351 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 GSDMBQ8TAX9 411 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 CLEC4CQ8WTT0 213 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 E2F7Q96AV8 911 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 LPIN3Q9BQK8 851 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 CXCL16Q9H2A7 254 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 PLAC1Q9HBJ0 212 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 SNTG2Q9NY99 539 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 ARMCX1Q9P291 453 aa11.32□□□□□ -0.6
NEIL1-202ENST00000561643 RPL26L1Q9UNX3 145 aaKnown RBP11.32□□□□□ -0.6
NEIL1-202ENST00000561643 F5H423 210 aaPredicted RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 KLF11O14901 512 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 HNRNPRO43390 633 aaKnown RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 RFPL1O75677 317 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 FAM200BP0CF97 657 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 LCP1P13796 627 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 ADORA2BP29275 332 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 GRM5P41594 1212 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 MAGEA6P43360 314 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 HEATR6Q6AI08 1181 aaKnown RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 KCNT2Q6UVM3 1135 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 LRRC74BQ6ZQY2 392 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 ALYREFQ86V81 257 aaKnown RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 LCA5Q86VQ0 697 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 ARID3BQ8IVW6 561 aaPredicted RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 NDUFAF2Q8N183 169 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 MPP5Q8N3R9 675 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 DEPDC1BQ8WUY9 529 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 GATA6Q92908 595 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 EBNA1BP2Q99848 306 aaKnown RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 MAGEB5Q9BZ81 275 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 ADARB2Q9NS39 739 aaKnown RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 AP4E1Q9UPM8 1137 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 A8MXQ7 604 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 H3BRB1 525 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 CYB561D2O14569 222 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 GSC2O15499 205 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 PFDN1O60925 122 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 LMNAP02545 664 aaKnown RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 L1CAMP32004 1257 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 MRPS5P82675 430 aaKnown RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 SLC10A2Q12908 348 aaPredicted RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 CASC4Q6P4E1 433 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 C4orf22Q6V702 233 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 KBTBD2Q8IY47 623 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 AZIN2Q96A70 460 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 MTBPQ96DY7 904 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 NMUR2Q9GZQ4 415 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 TUT1Q9H6E5 874 aaKnown RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 RNF19AQ9NV58 838 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 MARCOQ9UEW3 520 aaPredicted RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 TUBGCP4Q9UGJ1 667 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 PDLIM1O00151 329 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 GCATO75600 419 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms