RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 PMS2P54278 862 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 USP46P62068 366 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 SLC45A4Q5BKX6 768 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 NCBP2-AS2Q69YL0 99 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 PSRC1Q6PGN9 363 aaPredicted RBP17.72■□□□□ 0.43
HDDC3-206ENST00000561036 TRMT10CQ7L0Y3 403 aaKnown RBP17.72■□□□□ 0.43
HDDC3-206ENST00000561036 C16orf59Q7L2K0 433 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 OTOP2Q7RTS6 562 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 UNC45BQ8IWX7 931 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 ZNF276Q8N554 614 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 ZNF461Q8TAF7 563 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 OVCA2Q8WZ82 227 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 RNF34Q969K3 372 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 CLSTN3Q9BQT9 956 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 MAGEB5Q9BZ81 275 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 ADAM7Q9H2U9 754 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 CRISPLD1Q9H336 500 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 PABPC3Q9H361 631 aaKnown RBP17.72■□□□□ 0.43
HDDC3-206ENST00000561036 USP29Q9HBJ7 922 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.72■□□□□ 0.43
HDDC3-206ENST00000561036 GMIPQ9P107 970 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 SHOC2Q9UQ13 582 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 SSX2IPQ9Y2D8 614 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 PCDHB12Q9Y5F1 795 aa17.72■□□□□ 0.43
HDDC3-206ENST00000561036 SLC38A8A6NNN8 435 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 AGPSO00116 658 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 CREB3O43889 395 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 GJB5O95377 273 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 ZDHHC11BP0C7U3 371 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 EN2P19622 333 aaPredicted RBP17.71■□□□□ 0.43
HDDC3-206ENST00000561036 RPL22P35268 128 aaKnown RBP17.71■□□□□ 0.43
HDDC3-206ENST00000561036 GGCXP38435 758 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 TPI1P60174 286 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 NRG1Q02297 640 aaPredicted RBP17.71■□□□□ 0.43
HDDC3-206ENST00000561036 MTA1Q13330 715 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 RAB33AQ14088 237 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 UAP1Q16222 522 aaPredicted RBP17.71■□□□□ 0.43
HDDC3-206ENST00000561036 KCTD19Q17RG1 926 aaPredicted RBP17.71■□□□□ 0.43
HDDC3-206ENST00000561036 ACBD5Q5T8D3 534 aaPredicted RBP17.71■□□□□ 0.43
HDDC3-206ENST00000561036 ZC3H18Q86VM9 953 aaKnown RBP17.71■□□□□ 0.43
HDDC3-206ENST00000561036 HOOK3Q86VS8 718 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 RELL1Q8IUW5 271 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 ZCCHC9Q8N567 271 aaKnown RBP17.71■□□□□ 0.43
HDDC3-206ENST00000561036 FAM71DQ8N9W8 422 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 GLIS1Q8NBF1 620 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 UBLCP1Q8WVY7 318 aaPredicted RBP17.71■□□□□ 0.43
HDDC3-206ENST00000561036 CASP10Q92851 521 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 OLFM3Q96PB7 478 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 ZIM3Q96PE6 472 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 QKIQ96PU8 341 aaKnown RBP eCLIP17.71■□□□□ 0.43
HDDC3-206ENST00000561036 CDK5RAP1Q96SZ6 601 aaKnown RBP17.71■□□□□ 0.43
HDDC3-206ENST00000561036 SH3GL2Q99962 352 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 PHACTR1Q9C0D0 580 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 ANLNQ9NQW6 1124 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 DTLQ9NZJ0 730 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 FNIP2Q9P278 1114 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 PAK5Q9P286 719 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 TLR6Q9Y2C9 796 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 ATP8A1Q9Y2Q0 1164 aa17.71■□□□□ 0.43
HDDC3-206ENST00000561036 KIAA0100Q14667 2235 aaKnown RBP17.7■□□□□ 0.42
HDDC3-206ENST00000561036 MYO16Q9Y6X6 1858 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 I6L893 689 aaPredicted RBP17.7■□□□□ 0.42
HDDC3-206ENST00000561036 DCLK1O15075 740 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 NCAM2O15394 837 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 ZSCAN5DPP0CG00 497 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 ETS1P14921 441 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 ACTN2P35609 894 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 PGFP49763 221 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 GDF10P55107 478 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 EIF3BP55884 814 aaKnown RBP17.7■□□□□ 0.42
HDDC3-206ENST00000561036 GBE1Q04446 702 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 TAF10Q12962 218 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 PDK1Q15118 436 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 RNASEH2BQ5TBB1 312 aaKnown RBP17.7■□□□□ 0.42
HDDC3-206ENST00000561036 TMCO2Q7Z6W1 182 aaPredicted RBP17.7■□□□□ 0.42
HDDC3-206ENST00000561036 PPIL6Q8IXY8 311 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 FIBCD1Q8N539 461 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 GOLGA6L1Q8N7Z2 621 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 PDZD8Q8NEN9 1154 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 BADQ92934 168 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 FERMT1Q9BQL6 677 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 UBE2OQ9C0C9 1292 aaKnown RBP17.7■□□□□ 0.42
HDDC3-206ENST00000561036 BRD8Q9H0E9 1235 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 TMPRSS4Q9NRS4 437 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.7■□□□□ 0.42
HDDC3-206ENST00000561036 OSER1Q9NX31 292 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 OR12D3Q9UGF7 316 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 INSL6Q9Y581 213 aa17.7■□□□□ 0.42
HDDC3-206ENST00000561036 ZBBXA8MT70 800 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 KCNU1A8MYU2 1149 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 GCATO75600 419 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 SOAT2O75908 522 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 SYF2O95926 243 aaKnown RBP17.69■□□□□ 0.42
HDDC3-206ENST00000561036 NUDT17P0C025 328 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 RPL17P18621 184 aaKnown RBP17.69■□□□□ 0.42
HDDC3-206ENST00000561036 ATF6P18850 670 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 KPNA1P52294 538 aaPredicted RBP17.69■□□□□ 0.42
HDDC3-206ENST00000561036 SLC10A2Q12908 348 aaPredicted RBP17.69■□□□□ 0.42
HDDC3-206ENST00000561036 SNX30Q5VWJ9 437 aa17.69■□□□□ 0.42
HDDC3-206ENST00000561036 TADA2BQ86TJ2 420 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms