RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 ZNF445P59923 1031 aa12.62□□□□□ -0.39
MARK3-221ENST00000560603 FNDC3BQ53EP0 1204 aaKnown RBP12.62□□□□□ -0.39
MARK3-221ENST00000560603 MPPE1Q53F39 396 aa12.62□□□□□ -0.39
MARK3-221ENST00000560603 FAM124AQ86V42 546 aa12.62□□□□□ -0.39
MARK3-221ENST00000560603 CACUL1Q86Y37 369 aa12.62□□□□□ -0.39
MARK3-221ENST00000560603 DENND1CQ8IV53 801 aa12.62□□□□□ -0.39
MARK3-221ENST00000560603 TTC39CQ8N584 583 aa12.62□□□□□ -0.39
MARK3-221ENST00000560603 PDCD7Q8N8D1 485 aaKnown RBP12.62□□□□□ -0.39
MARK3-221ENST00000560603 C1orf216Q8TAB5 229 aa12.62□□□□□ -0.39
MARK3-221ENST00000560603 WFIKKN2Q8TEU8 576 aa12.62□□□□□ -0.39
MARK3-221ENST00000560603 PLD4Q96BZ4 506 aa12.62□□□□□ -0.39
MARK3-221ENST00000560603 LRIG1Q96JA1 1093 aa12.62□□□□□ -0.39
MARK3-221ENST00000560603 TWNKQ96RR1 684 aa12.62□□□□□ -0.39
MARK3-221ENST00000560603 NIF3L1Q9GZT8 377 aa12.62□□□□□ -0.39
MARK3-221ENST00000560603 OSGEPQ9NPF4 335 aa12.62□□□□□ -0.39
MARK3-221ENST00000560603 CKAP5Q14008 2032 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 SLC12A8A0AV02 714 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 TRABD2BA6NFA1 517 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 MAPK13O15264 365 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 DFNA5O60443 496 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 DKK1O94907 266 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 KRT13P13646 458 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 PDIA4P13667 645 aaKnown RBP12.61□□□□□ -0.39
MARK3-221ENST00000560603 CD58P19256 250 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 GRIA4P48058 902 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 ME1P48163 572 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 HARS2P49590 506 aaKnown RBP12.61□□□□□ -0.39
MARK3-221ENST00000560603 CCT8P50990 548 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 VAMP7P51809 220 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 BNC1Q01954 994 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 ZBTB16Q05516 673 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 CYP4F3Q08477 520 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 PDE4CQ08493 712 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 STK4Q13043 487 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 CAMK2GQ13555 558 aaPredicted RBP12.61□□□□□ -0.39
MARK3-221ENST00000560603 KIF19Q2TAC6 998 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 TTC31Q49AM3 519 aaPredicted RBP12.61□□□□□ -0.39
MARK3-221ENST00000560603 PPP1R26Q5T8A7 1209 aaPredicted RBP12.61□□□□□ -0.39
MARK3-221ENST00000560603 ADAT2Q7Z6V5 191 aaKnown RBP12.61□□□□□ -0.39
MARK3-221ENST00000560603 SCUBE3Q8IX30 993 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 IGSF8Q969P0 613 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 FAXDC2Q96IV6 333 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 HEXIM2Q96MH2 286 aaKnown RBP12.61□□□□□ -0.39
MARK3-221ENST00000560603 UBXN6Q9BZV1 441 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 BTBD1Q9H0C5 482 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 KCTD10Q9H3F6 313 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 OLA1Q9NTK5 396 aaKnown RBP12.61□□□□□ -0.39
MARK3-221ENST00000560603 FOXD4L1Q9NU39 408 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 TOR4AQ9NXH8 423 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.61□□□□□ -0.39
MARK3-221ENST00000560603 ANKRD6Q9Y2G4 727 aa12.61□□□□□ -0.39
MARK3-221ENST00000560603 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.61□□□□□ -0.39
MARK3-221ENST00000560603 PCDHGA12O60330 932 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 SEMA4FO95754 770 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 DNTTP04053 509 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 SLFN14P0C7P3 912 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 CD27P26842 260 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 BCAT1P54687 386 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 YWHAGP61981 247 aaKnown RBP eCLIP12.6□□□□□ -0.39
MARK3-221ENST00000560603 ENPEPQ07075 957 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 SFSWAPQ12872 951 aaKnown RBP12.6□□□□□ -0.39
MARK3-221ENST00000560603 NUMA1Q14980 2115 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 RESP18Q5W5W9 173 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 INTS8Q75QN2 995 aaKnown RBP12.6□□□□□ -0.39
MARK3-221ENST00000560603 KIAA0895Q8NCT3 520 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 SORCS1Q8WY21 1168 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 GOLGA1Q92805 767 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 CCDC47Q96A33 483 aaKnown RBP12.6□□□□□ -0.39
MARK3-221ENST00000560603 SKA1Q96BD8 255 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 P2RY11Q96G91 374 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 C6orf106Q9H6K1 298 aaPredicted RBP12.6□□□□□ -0.39
MARK3-221ENST00000560603 SGK2Q9HBY8 427 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 TM9SF3Q9HD45 589 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 SUN2Q9UH99 717 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 SNX11Q9Y5W9 270 aa12.6□□□□□ -0.39
MARK3-221ENST00000560603 BPTFQ12830 3046 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 A0A087WV48 116 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 KLRC4O43908 158 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 FSBPO95073 299 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 ATP5BP06576 529 aaKnown RBP12.59□□□□□ -0.39
MARK3-221ENST00000560603 CDK4P11802 303 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 HLA-EP13747 358 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 ACSL1P33121 698 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 GCLMP48507 274 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 TRIP4Q15650 581 aaPredicted RBP12.59□□□□□ -0.39
MARK3-221ENST00000560603 SMAD1Q15797 465 aaKnown RBP12.59□□□□□ -0.39
MARK3-221ENST00000560603 KMT5BQ4FZB7 885 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 ZNF394Q53GI3 561 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 CCDC157Q569K6 752 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 ATL3Q6DD88 541 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 FAM217AQ8IXS0 508 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 GRAMD1CQ8IYS0 662 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 ZNF557Q8N988 423 aaPredicted RBP12.59□□□□□ -0.39
MARK3-221ENST00000560603 RBBP8NLQ8NC74 664 aaPredicted RBP12.59□□□□□ -0.39
MARK3-221ENST00000560603 TAS1R2Q8TE23 839 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 RNF139Q8WU17 664 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 TMA16Q96EY4 203 aaKnown RBP12.59□□□□□ -0.39
MARK3-221ENST00000560603 ARID3AQ99856 593 aa12.59□□□□□ -0.39
MARK3-221ENST00000560603 APOBEC3GQ9HC16 384 aaKnown RBP12.59□□□□□ -0.39
MARK3-221ENST00000560603 FTSJ1Q9UET6 329 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms