RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CRELD1Q96HD1 420 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 ZNF396Q96N95 335 aaPredicted RBP11□□□□□ -0.65
CDC42BPB-207ENST00000560492 BBC3Q96PG8 261 aaPredicted RBP11□□□□□ -0.65
CDC42BPB-207ENST00000560492 C7orf25Q9BPX7 421 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 NT5C1AQ9BXI3 368 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 GZF1Q9H116 711 aaPredicted RBP11□□□□□ -0.65
CDC42BPB-207ENST00000560492 ZSCAN16Q9H4T2 348 aaPredicted RBP11□□□□□ -0.65
CDC42BPB-207ENST00000560492 C6orf106Q9H6K1 298 aaPredicted RBP11□□□□□ -0.65
CDC42BPB-207ENST00000560492 EXOC1Q9NV70 894 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 FTSJ1Q9UET6 329 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 ANKRD6Q9Y2G4 727 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 SLC27A6Q9Y2P4 619 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 BPTFQ12830 3046 aa11□□□□□ -0.65
CDC42BPB-207ENST00000560492 FAM47DPA6NHR8 397 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 TNFSF14O43557 240 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 TSPAN3O60637 253 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 HLA-DRAP01903 254 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 KLKB1P03952 638 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 DNTTP04053 509 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 RPN1P04843 607 aaKnown RBP10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 GRK6P43250 576 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 COPAP53621 1224 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 C21orf59P57076 290 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 DLG4P78352 724 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 BNC1Q01954 994 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 CUL4AQ13619 759 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 EIF4HQ15056 248 aaKnown RBP10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 KIF19Q2TAC6 998 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 TTC31Q49AM3 519 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 ZNF394Q53GI3 561 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 FOXD4L5Q5VV16 416 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 KLHDC10Q6PID8 442 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 C12orf56Q8IXR9 622 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 CEP57L1Q8IYX8 460 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 OR2T3Q8NH03 318 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 CYB5D2Q8WUJ1 264 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 FOXD4L4Q8WXT5 416 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 TAF4BQ92750 862 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 HNRNPABQ99729 332 aaKnown RBP10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 BTBD1Q9H0C5 482 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 MAGEF1Q9HAY2 307 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 TM9SF3Q9HD45 589 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 TOR4AQ9NXH8 423 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 FAM13BQ9NYF5 915 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 MARCH2Q9P0N8 246 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 AGO1Q9UL18 857 aaKnown RBP10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 PLA2G4CQ9UP65 541 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 FRMD4BQ9Y2L6 1034 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 PCDHGB2Q9Y5G2 931 aa10.99□□□□□ -0.65
CDC42BPB-207ENST00000560492 HHLA1C9JL84 531 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 PLK4O00444 970 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 CUTAO60888 179 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 SEMA4FO95754 770 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 PENKP01210 267 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 PRB1P04280 392 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 ACSL1P33121 698 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 ASPAP45381 313 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 NASPP49321 788 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 KIF11P52732 1056 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 SLC8A3P57103 927 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 C19orf57Q0VDD7 668 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 CUL4BQ13620 913 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 LRRC69Q6ZNQ3 347 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 SV2AQ7L0J3 742 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 CCDC186Q7Z3E2 898 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 SCD5Q86SK9 330 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 GRAMD1CQ8IYS0 662 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 ARHGAP18Q8N392 663 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 LINC00301Q8NCQ3 95 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 BAHD1Q8TBE0 780 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 HEXIM2Q96MH2 286 aaKnown RBP10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 TWNKQ96RR1 684 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 ARID3AQ99856 593 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 PNPLA8Q9NP80 782 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 FBXO10Q9UK96 956 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 MTMR6Q9Y217 621 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 AK5Q9Y6K8 562 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 SLCO1B1Q9Y6L6 691 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 CABIN1Q9Y6J0 2220 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 LAMA5O15230 3695 aa10.98□□□□□ -0.65
CDC42BPB-207ENST00000560492 MYLKQ15746 1914 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 CELSR3Q9NYQ7 3312 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 KNL1Q8NG31 2342 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 H0Y8X5 98 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 TIMM44O43615 452 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 PPP6R2O75170 966 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 ASS1P00966 412 aaKnown RBP10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 NR3C1P04150 777 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 JUPP14923 745 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 ABCB4P21439 1286 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 HNF1BP35680 557 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 GRIA4P48058 902 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 ME1P48163 572 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 HARS2P49590 506 aaKnown RBP10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 BCAT1P54687 386 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 YWHAGP61981 247 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 SEMG2Q02383 582 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 ZACNQ401N2 412 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 MPPE1Q53F39 396 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 C6orf118Q5T5N4 469 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms