RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 RASSF10A6NK89 507 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 TBC1D12O60347 775 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 LTFP02788 710 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 GJC2Q5T442 439 aaPredicted RBP13.81□□□□□ -0.2
TRAF3-208ENST00000560371 DEPDC1Q5TB30 811 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 MCOLN2Q8IZK6 566 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 TKTL2Q9H0I9 626 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 KRT84Q9NSB2 600 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 TPBGLP0DKB5 382 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 HIRAP54198 1017 aaPredicted RBP13.81□□□□□ -0.2
TRAF3-208ENST00000560371 MRPS23Q9Y3D9 190 aaKnown RBP13.81□□□□□ -0.2
TRAF3-208ENST00000560371 RAD54BQ9Y620 910 aa13.81□□□□□ -0.2
TRAF3-208ENST00000560371 CTSEP14091 401 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 KBTBD12Q3ZCT8 623 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 FBXL16Q8N461 479 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 FIBCD1Q8N539 461 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 TRPM4Q8TD43 1214 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 ASAH2Q9NR71 780 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 AKAP7Q9P0M2 348 aaPredicted RBP13.8□□□□□ -0.2
TRAF3-208ENST00000560371 CYTH3O43739 400 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 STAU1O95793 577 aaKnown RBP13.8□□□□□ -0.2
TRAF3-208ENST00000560371 HSD17B3P37058 310 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 MTSS1LQ765P7 747 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 P3H2Q8IVL5 708 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 HOMEZQ8IX15 550 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 SYTL1Q8IYJ3 562 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 ZNF473Q8WTR7 871 aaKnown RBP13.8□□□□□ -0.2
TRAF3-208ENST00000560371 APBA2Q99767 749 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 RMND5AQ9H871 391 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 CCDC85CA6NKD9 419 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 RPN2P04844 631 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 FUT11Q495W5 492 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 KIAA0319LQ8IZA0 1049 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 C2orf49Q9BVC5 232 aaPredicted RBP13.8□□□□□ -0.2
TRAF3-208ENST00000560371 VPS51Q9UID3 782 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 TDRKHQ9Y2W6 561 aaKnown RBP13.8□□□□□ -0.2
TRAF3-208ENST00000560371 VGLL3A8MV65 326 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 SMIM10L2AP0DMW4 78 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 SMIM10L2BP0DMW5 78 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 ZNF7P17097 686 aaPredicted RBP13.8□□□□□ -0.2
TRAF3-208ENST00000560371 ITGB6P18564 788 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 AP1ARQ63HQ0 302 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 COPS5Q92905 334 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 AHSPQ9NZD4 102 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 ADCY6O43306 1168 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 BMP10O95393 424 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 CYP2A7P20853 494 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 PTPN3P26045 913 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 CSTF3Q12996 717 aaKnown RBP13.8□□□□□ -0.2
TRAF3-208ENST00000560371 BOP1Q14137 746 aaKnown RBP13.8□□□□□ -0.2
TRAF3-208ENST00000560371 SEL1L3Q68CR1 1132 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 LONP2Q86WA8 852 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 AGGF1Q8N302 714 aaeCLIP13.8□□□□□ -0.2
TRAF3-208ENST00000560371 CASP10Q92851 521 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 POPDC2Q9HBU9 364 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 KRCC1Q9NPI7 259 aaPredicted RBP13.8□□□□□ -0.2
TRAF3-208ENST00000560371 NUDT2P50583 147 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 PARP9Q8IXQ6 854 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 LENG9Q96B70 501 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 PAWRQ96IZ0 340 aaKnown RBP13.8□□□□□ -0.2
TRAF3-208ENST00000560371 TBCBQ99426 244 aa13.8□□□□□ -0.2
TRAF3-208ENST00000560371 TLL1O43897 1013 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 SCNN1GP51170 649 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 NOMO2Q5JPE7 1267 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 MOB2Q70IA6 237 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 IL17RAQ96F46 866 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 SEC16BQ96JE7 1060 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 TMEM134Q9H6X4 195 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 RNF19AQ9NV58 838 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 SEPT3Q9UH03 358 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 PRRC2BQ5JSZ5 2229 aaKnown RBP13.79□□□□□ -0.2
TRAF3-208ENST00000560371 TMEM88BA6NKF7 163 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 MAN1A2O60476 641 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 PTPN1P18031 435 aaKnown RBP13.79□□□□□ -0.2
TRAF3-208ENST00000560371 HDCP19113 662 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 PSMA3P25788 255 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 CREMQ03060 361 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 CDH17Q12864 832 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 PGS1Q32NB8 556 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 NLRP9Q7RTR0 991 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 CORO1BQ9BR76 489 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 CEP41Q9BYV8 373 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 UBA2Q9UBT2 640 aaPredicted RBP13.79□□□□□ -0.2
TRAF3-208ENST00000560371 SOX13Q9UN79 622 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 CAPN6Q9Y6Q1 641 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 GAKO14976 1311 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 KCNK1O00180 336 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 CYP2A6P11509 494 aaPredicted RBP13.79□□□□□ -0.2
TRAF3-208ENST00000560371 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
TRAF3-208ENST00000560371 COPAP53621 1224 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 PLEKHM3Q6ZWE6 761 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 RPAINQ86UA6 219 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 DEFB106AQ8N104 65 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 SKP1P63208 163 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 CSHL1Q14406 222 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 WSCD1Q658N2 575 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 ELMO3Q96BJ8 720 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 TRHDEQ9UKU6 1024 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 KIAA0100Q14667 2235 aaKnown RBP13.79□□□□□ -0.2
TRAF3-208ENST00000560371 ALDH9A1P49189 494 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms