RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 TBL3Q12788 808 aaKnown RBP6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 BFSP1Q12934 665 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 PPP2R5CQ13362 524 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 PDK3Q15120 406 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 MAPK6Q16659 721 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 BBS9Q3SYG4 887 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 EPC2Q52LR7 807 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 PDCD4Q53EL6 469 aaKnown RBP6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 EFHC1Q5JVL4 640 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 SYCP2LQ5T4T6 812 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 SUSD4Q5VX71 490 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 ATG16L1Q676U5 607 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 KRT39Q6A163 491 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 HEATR6Q6AI08 1181 aaKnown RBP6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 CIAPIN1Q6FI81 312 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 ACAD10Q6JQN1 1059 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 UGT2A3Q6UWM9 527 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 SEPT14Q6ZU15 432 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 ANO5Q75V66 913 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 CCDC80Q76M96 950 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 ZNF677Q86XU0 584 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 DNAAF5Q86Y56 855 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 MAP7D3Q8IWC1 876 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 FAM71AQ8IYT1 594 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 KATNAL2Q8IYT4 538 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 BBS5Q8N3I7 341 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 BANPQ8N9N5 519 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 ATP11CQ8NB49 1132 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 ICA1LQ8NDH6 482 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 LMO3Q8TAP4 145 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 ETNPPLQ8TBG4 499 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 FNDC8Q8TC99 324 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 PLEKHO2Q8TD55 490 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 DTX3LQ8TDB6 740 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 MZB1Q8WU39 189 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 GAB3Q8WWW8 586 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 WFDC12Q8WWY7 111 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 MTBPQ96DY7 904 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 APOPT1Q96IL0 206 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 VPS50Q96JG6 964 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 FAM84BQ96KN1 310 aaPredicted RBP6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 PANX3Q96QZ0 392 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 APBA2Q99767 749 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 WDR18Q9BV38 432 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 NUP85Q9BW27 656 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 FAM126AQ9BYI3 521 aaPredicted RBP6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 KCNK13Q9HB14 408 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 USP29Q9HBJ7 922 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 TUFT1Q9NNX1 390 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 SAYSD1Q9NPB0 183 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 SEPT11Q9NVA2 429 aaKnown RBP6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 TUBA8Q9NY65 449 aaPredicted RBP6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 TBC1D7Q9P0N9 293 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 C6orf203Q9P0P8 240 aaPredicted RBP6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 BTBD7Q9P203 1132 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 TBK1Q9UHD2 729 aa6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 SAP30BPQ9UHR5 308 aaKnown RBP6.18□□□□□ -1.42
SNRPA1-209ENST00000560307 COL5A3P25940 1745 aaPredicted RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 C15orf38-AP3S2A0A0A6YYH1 394 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 TRAV20A0A0B4J274 112 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 CCDC163A0A0D9SF12 145 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 IQANK1A0A1B0GTG1 560 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 KANSL1LA0AUZ9 987 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 TMEM110-MUSTN1A8MSY1 372 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 E7ESA3 106 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 H0YJX3 145 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 H3BNX3 289 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 MATN2O00339 956 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 FOXN3O00409 490 aaPredicted RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 VILLO15195 856 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 TOM1O60784 492 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 CLASP2O75122 1294 aaKnown RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 MED26O95402 600 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 EIF2S1P05198 315 aaKnown RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 HNRNPCP07910 306 aaKnown RBP eCLIP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 SERPINA6P08185 405 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 CD48P09326 243 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 CDK4P11802 303 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 PORP16435 677 aaPredicted RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 VCLP18206 1134 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 PRDX6P30041 224 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 GTF2H1P32780 548 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 ETV4P43268 484 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 GYG1P46976 350 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 CEBPAP49715 358 aaPredicted RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 CDKN1CP49918 316 aaPredicted RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 NR1H2P55055 460 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 ARL4CP56559 192 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 NOP14P78316 857 aaKnown RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 NFKB2Q00653 900 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 ID3Q02535 119 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 SPIRE1Q08AE8 756 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 MSLNQ13421 630 aaPredicted RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 APOFQ13790 326 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 KRT81Q14533 505 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 TNIP1Q15025 636 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 CERKLQ49MI3 558 aaPredicted RBP6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 SLC44A4Q53GD3 710 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 TM4SF20Q53R12 229 aa6.17□□□□□ -1.42
SNRPA1-209ENST00000560307 ZC3H12BQ5HYM0 836 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms