RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 LZTS1Q9Y250 596 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.44■□□□□ 0.54
SNX1-208ENST00000559844 H7C0C1 242 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 CLDN5O00501 218 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 C2CD2LO14523 706 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 GRM6O15303 877 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 SLCO1A2P46721 670 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 ATP5OP48047 213 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 GLUD2P49448 558 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 SLC25A52Q3SY17 297 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 PSTKQ8IV42 348 aaKnown RBP18.44■□□□□ 0.54
SNX1-208ENST00000559844 PLD5Q8N7P1 536 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 PRDM16Q9HAZ2 1276 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 CRTAC1Q9NQ79 661 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 KRT82Q9NSB4 513 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 STAP1Q9ULZ2 295 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 A0A087WUV0 522 aaPredicted RBP18.43■□□□□ 0.54
SNX1-208ENST00000559844 EPOPA6NHQ4 379 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 SOX1O00570 391 aaPredicted RBP18.43■□□□□ 0.54
SNX1-208ENST00000559844 URODP06132 367 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 DNAJB1P25685 340 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 NOS2P35228 1153 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 SULT1E1P49888 294 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 YWHAZP63104 245 aaKnown RBP18.43■□□□□ 0.54
SNX1-208ENST00000559844 UBE3AQ05086 875 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 ADCY1Q08828 1119 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 CA9Q16790 459 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 LONRF1Q17RB8 773 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 KIAA0319Q5VV43 1072 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 C1orf228Q6PIY5 440 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 NPNTQ6UXI9 565 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 DEFB106AQ8N104 65 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 PQLC3Q8N755 202 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 FAM71DQ8N9W8 422 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 GDPD5Q8WTR4 605 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 FAM149B1Q96BN6 582 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 CENPTQ96BT3 561 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 C9orf72Q96LT7 481 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 ZBP1Q9H171 429 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 ZNF576Q9H609 170 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 TLR9Q9NR96 1032 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 AP4E1Q9UPM8 1137 aa18.43■□□□□ 0.54
SNX1-208ENST00000559844 ALOX15BO15296 676 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 OAZ2O95190 189 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 TFE3P19532 575 aaPredicted RBP18.42■□□□□ 0.54
SNX1-208ENST00000559844 L1CAMP32004 1257 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 CA8P35219 290 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 MMP13P45452 471 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 ARL4CP56559 192 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 MAP3K7CLP57077 242 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 CCDC142Q17RM4 750 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 PRSS55Q6UWB4 352 aaPredicted RBP18.42■□□□□ 0.54
SNX1-208ENST00000559844 FAM35AQ86V20 835 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 RIBC1Q8N443 379 aaPredicted RBP18.42■□□□□ 0.54
SNX1-208ENST00000559844 NAT8LQ8N9F0 302 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 PCDH19Q8TAB3 1148 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 MYCBPAPQ8TBZ2 947 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 AUTS2Q8WXX7 1259 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 CPT1BQ92523 772 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 TCF25Q9BQ70 676 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 DHX35Q9H5Z1 703 aaKnown RBP18.42■□□□□ 0.54
SNX1-208ENST00000559844 TRANK1O15050 2925 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 BEST1O76090 585 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 CYP2F1P24903 491 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 ERVFC1P60507 584 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 IFI35P80217 286 aaPredicted RBP18.42■□□□□ 0.54
SNX1-208ENST00000559844 DSG1Q02413 1049 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 HIF1AQ16665 826 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 PPP6R3Q5H9R7 873 aaPredicted RBP18.42■□□□□ 0.54
SNX1-208ENST00000559844 C4orf22Q6V702 233 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 ANKS3Q6ZW76 656 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 TMC7Q7Z402 723 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 ZC3H18Q86VM9 953 aaKnown RBP18.42■□□□□ 0.54
SNX1-208ENST00000559844 SLC2A13Q96QE2 648 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 C10orf88Q9H8K7 445 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 ENTPD7Q9NQZ7 604 aa18.42■□□□□ 0.54
SNX1-208ENST00000559844 MRPL17Q9NRX2 175 aaKnown RBP18.42■□□□□ 0.54
SNX1-208ENST00000559844 RCOR3Q9P2K3 495 aaPredicted RBP18.42■□□□□ 0.54
SNX1-208ENST00000559844 BCLAF3A2AJT9 711 aaKnown RBP18.41■□□□□ 0.54
SNX1-208ENST00000559844 AP1G2O75843 785 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 CTSAP10619 480 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 TKTL1P51854 596 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 PSMD5Q16401 504 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 CTXN3Q4LDR2 81 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 ZNF280DQ6N043 979 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 CDKL3Q8IVW4 592 aaPredicted RBP18.41■□□□□ 0.54
SNX1-208ENST00000559844 THEM5Q8N1Q8 247 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 RTP4Q96DX8 246 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 PCED1BQ96HM7 432 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 SELENOSQ9BQE4 189 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 PPCSQ9HAB8 311 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 PAK5Q9P286 719 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 LGALS13Q9UHV8 139 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 PRDM4Q9UKN5 801 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 RFXAPO00287 272 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 CDH16O75309 829 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 NR2C2P49116 596 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 XRCC4Q13426 336 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 CAMK1Q14012 370 aa18.41■□□□□ 0.54
SNX1-208ENST00000559844 MRPL58Q14197 206 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms