RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 GPRIN1Q7Z2K8 1008 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 FAM35AQ86V20 835 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 DTX1Q86Y01 620 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 TMEM25Q86YD3 366 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 TMEFF1Q8IYR6 380 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 GRAMD1CQ8IYS0 662 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 NUP93Q8N1F7 819 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 NAT16Q8N8M0 369 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 KIAA0895Q8NCT3 520 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 PARD3BQ8TEW8 1205 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 TMEM174Q8WUU8 243 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 OVCA2Q8WZ82 227 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 CHAMP1Q96JM3 812 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 SLITRK1Q96PX8 696 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 TWNKQ96RR1 684 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 ACOX2Q99424 681 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 CUEDC2Q9H467 287 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 CSNK1G1Q9HCP0 422 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 SLC39A2Q9NP94 309 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 CD93Q9NPY3 652 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 FSCN3Q9NQT6 498 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 ARHGEF4Q9NR80 690 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 GMIPQ9P107 970 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 EVLQ9UI08 416 aaPredicted RBP6.14□□□□□ -1.43
USP3-215ENST00000559771 PILRBQ9UKJ0 227 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 PCDHA7Q9UN72 937 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 UBE4BO95155 1302 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 MYO18AQ92614 2054 aaKnown RBP6.14□□□□□ -1.43
USP3-215ENST00000559771 ITPR1Q14643 2758 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 ASCC3Q8N3C0 2202 aaKnown RBP6.13□□□□□ -1.43
USP3-215ENST00000559771 PVALEFA0A1B0GWK0 134 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 PRRT4C9JH25 899 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 GOLGA6L22H0YM25 854 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 SLC9A3R1O14745 358 aaPredicted RBP6.13□□□□□ -1.43
USP3-215ENST00000559771 POLR2DO15514 142 aaKnown RBP6.13□□□□□ -1.43
USP3-215ENST00000559771 RTN3O95197 1032 aaPredicted RBP6.13□□□□□ -1.43
USP3-215ENST00000559771 TBX18O95935 607 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 CAPNS1P04632 268 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 APODP05090 189 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 CISD3P0C7P0 127 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 PDIA4P13667 645 aaKnown RBP6.13□□□□□ -1.43
USP3-215ENST00000559771 CEACAM1P13688 526 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 CCDC130P13994 396 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 ITPKAP23677 461 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 ATICP31939 592 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 GRIA2P42262 883 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 ASPAP45381 313 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 DHPSP49366 369 aaPredicted RBP6.13□□□□□ -1.43
USP3-215ENST00000559771 TUBP50607 506 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 SNRPFP62306 86 aaKnown RBP6.13□□□□□ -1.43
USP3-215ENST00000559771 TNNC1P63316 161 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 FAM193AP78312 1265 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 ZNF252P-AS1Q0IIN9 211 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 PKP1Q13835 747 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 KNOP1Q1ED39 458 aaKnown RBP6.13□□□□□ -1.43
USP3-215ENST00000559771 ZACNQ401N2 412 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 HSF5Q4G112 596 aaPredicted RBP6.13□□□□□ -1.43
USP3-215ENST00000559771 TRIM61Q5EBN2 209 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 HECTD3Q5T447 861 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 RESP18Q5W5W9 173 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 EGFLAMQ63HQ2 1017 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 SPOPLQ6IQ16 392 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 KIAA1211LQ6NV74 962 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 SLC23A3Q6PIS1 610 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 STXBP4Q6ZWJ1 553 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 ARMCX6Q7L4S7 300 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 PIP4P1Q86T03 277 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 ACOT1Q86TX2 421 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 CRYBG2Q8N1P7 616 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 C12orf29Q8N999 325 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 TERB1Q8NA31 727 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 IQUBQ8NA54 791 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 DEFB124Q8NES8 71 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 CCDC26Q8TAB7 109 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 HMGB4Q8WW32 186 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 PIGKQ92643 395 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 GATA6Q92908 595 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 FBXO32Q969P5 355 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 SYAP1Q96A49 352 aaPredicted RBP6.13□□□□□ -1.43
USP3-215ENST00000559771 EXOC4Q96A65 974 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 LRRC27Q9C0I9 530 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 KCTD10Q9H3F6 313 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 NMUR1Q9HB89 426 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 ETNK1Q9HBU6 452 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 CAPN10Q9HC96 672 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 TMEM9BQ9NQ34 198 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 SPHK2Q9NRA0 654 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 EHD2Q9NZN4 543 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 TBC1D14Q9P2M4 693 aa6.13□□□□□ -1.43
USP3-215ENST00000559771 ATXN2Q99700 1313 aaKnown RBP6.13□□□□□ -1.43
USP3-215ENST00000559771 IGHV1OR15-9A0A0B4J2B8 117 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 TCRBV21S2A2A0A5A6 115 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 MUC22E2RYF6 1773 aaPredicted RBP6.12□□□□□ -1.43
USP3-215ENST00000559771 MDM4O15151 490 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 CYP26A1O43174 497 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 CACNG3O60359 315 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 EXOC3O60645 756 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 AP1G2O75843 785 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 ASS1P00966 412 aaKnown RBP6.12□□□□□ -1.43
USP3-215ENST00000559771 KLKB1P03952 638 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms