RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 CSF1P09603 554 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 HKR1P10072 659 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 CPA1P15085 419 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 NDUFB7P17568 137 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 KRT9P35527 623 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 RCAN1P53805 252 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 NR1H2P55055 460 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 TAS2R50P59544 299 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 SPATS1Q496A3 300 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 KIRREL2Q6UWL6 708 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 CLEC4GQ6UXB4 293 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 SPRED1Q7Z699 444 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 OR52L2PQ8NGH6 319 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 RBM17Q96I25 401 aaKnown RBP12.37□□□□□ -0.43
CASC4-208ENST00000559151 PIGSQ96S52 555 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 CDCP1Q9H5V8 836 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 SYBUQ9NX95 663 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 ADAMTS5Q9UNA0 930 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 TTLL1O95922 423 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 HNRNPA1P09651 372 aaKnown RBP eCLIP12.36□□□□□ -0.43
CASC4-208ENST00000559151 NPSP0C0P6 89 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 ELFN1P0C7U0 828 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 CXCR5P32302 372 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 GALNSP34059 522 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 GRIA3P42263 894 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 FOXL2P58012 376 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 GPC5P78333 572 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 MRPS35P82673 323 aaKnown RBP12.36□□□□□ -0.43
CASC4-208ENST00000559151 TBC1D25Q3MII6 688 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 DENND2CQ68D51 928 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 LAIR1Q6GTX8 287 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 FAM180BQ6P0A1 224 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 ACTRT2Q8TDY3 377 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 CLEC4CQ8WTT0 213 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 GLMPQ8WWB7 406 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 LINC00476Q8WZB0 136 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 ELOVL1Q9BW60 279 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 MMRN2Q9H8L6 949 aa12.36□□□□□ -0.43
CASC4-208ENST00000559151 QSOX1O00391 747 aa12.35□□□□□ -0.43
CASC4-208ENST00000559151 SEPT4O43236 478 aa12.35□□□□□ -0.43
CASC4-208ENST00000559151 KLK10O43240 276 aa12.35□□□□□ -0.43
CASC4-208ENST00000559151 EEFSECP57772 596 aaKnown RBP12.35□□□□□ -0.43
CASC4-208ENST00000559151 ANKRD16Q6P6B7 361 aa12.35□□□□□ -0.43
CASC4-208ENST00000559151 KIAA1324Q6UXG2 1013 aaKnown RBP12.35□□□□□ -0.43
CASC4-208ENST00000559151 Q6YL49 198 aa12.35□□□□□ -0.43
CASC4-208ENST00000559151 USP38Q8NB14 1042 aa12.35□□□□□ -0.43
CASC4-208ENST00000559151 CYP3A4P08684 503 aa12.34□□□□□ -0.43
CASC4-208ENST00000559151 MYCLP12524 364 aaPredicted RBP12.34□□□□□ -0.43
CASC4-208ENST00000559151 MPLP40238 635 aa12.34□□□□□ -0.43
CASC4-208ENST00000559151 TLE3Q04726 772 aa12.34□□□□□ -0.43
CASC4-208ENST00000559151 MPP3Q13368 585 aa12.34□□□□□ -0.43
CASC4-208ENST00000559151 RNASE12Q5GAN4 147 aaKnown RBP12.34□□□□□ -0.43
CASC4-208ENST00000559151 KRTAP19-1Q8IUB9 90 aa12.34□□□□□ -0.43
CASC4-208ENST00000559151 SFTPA1Q8IWL2 248 aa12.34□□□□□ -0.43
CASC4-208ENST00000559151 PTGR2Q8N8N7 351 aaPredicted RBP12.34□□□□□ -0.43
CASC4-208ENST00000559151 STAMQ92783 540 aa12.34□□□□□ -0.43
CASC4-208ENST00000559151 EDC3Q96F86 508 aaKnown RBP12.34□□□□□ -0.43
CASC4-208ENST00000559151 THAP7Q9BT49 309 aaPredicted RBP12.34□□□□□ -0.43
CASC4-208ENST00000559151 ABHD10Q9NUJ1 306 aa12.34□□□□□ -0.43
CASC4-208ENST00000559151 LRIT1Q9P2V4 623 aa12.34□□□□□ -0.43
CASC4-208ENST00000559151 ST3GAL5Q9UNP4 418 aa12.34□□□□□ -0.43
CASC4-208ENST00000559151 SALL3Q9BXA9 1300 aa12.34□□□□□ -0.43
CASC4-208ENST00000559151 TGM1P22735 817 aa12.33□□□□□ -0.44
CASC4-208ENST00000559151 JAK3P52333 1124 aa12.33□□□□□ -0.44
CASC4-208ENST00000559151 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.33□□□□□ -0.44
CASC4-208ENST00000559151 SLC9C2Q5TAH2 1124 aa12.33□□□□□ -0.44
CASC4-208ENST00000559151 FAAH2Q6GMR7 532 aa12.33□□□□□ -0.44
CASC4-208ENST00000559151 WDR93Q6P2C0 686 aa12.33□□□□□ -0.44
CASC4-208ENST00000559151 MTHFD1LQ6UB35 978 aa12.33□□□□□ -0.44
CASC4-208ENST00000559151 C1orf122Q6ZSJ8 110 aa12.33□□□□□ -0.44
CASC4-208ENST00000559151 C12orf76Q8N812 135 aaPredicted RBP12.33□□□□□ -0.44
CASC4-208ENST00000559151 CAVIN3Q969G5 261 aa12.33□□□□□ -0.44
CASC4-208ENST00000559151 ARRDC3Q96B67 414 aa12.33□□□□□ -0.44
CASC4-208ENST00000559151 SNX18Q96RF0 628 aa12.33□□□□□ -0.44
CASC4-208ENST00000559151 TERF2IPQ9NYB0 399 aa12.33□□□□□ -0.44
CASC4-208ENST00000559151 ARHGAP26Q9UNA1 814 aa12.33□□□□□ -0.44
CASC4-208ENST00000559151 AFG3L2Q9Y4W6 797 aa12.33□□□□□ -0.44
CASC4-208ENST00000559151 CCDC196A0A1B0GTZ2 297 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 SAC3D1A6NKF1 404 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 HNRNPRO43390 633 aaKnown RBP12.32□□□□□ -0.44
CASC4-208ENST00000559151 TSPAN3O60637 253 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 ACP5P13686 325 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 CHN1P15882 459 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 MATN1P21941 496 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 ADRA1BP35368 520 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 PCID2Q5JVF3 399 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 VRK3Q8IV63 474 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 ST8SIA4Q92187 359 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 COQ10AQ96MF6 247 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 AGXT2Q9BYV1 514 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 JMJD4Q9H9V9 463 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 CYP4F11Q9HBI6 524 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 EPN1Q9Y6I3 576 aaPredicted RBP12.32□□□□□ -0.44
CASC4-208ENST00000559151 LMTK3Q96Q04 1460 aa12.32□□□□□ -0.44
CASC4-208ENST00000559151 ESRRBO95718 433 aa12.31□□□□□ -0.44
CASC4-208ENST00000559151 AVPR1BP47901 424 aa12.31□□□□□ -0.44
CASC4-208ENST00000559151 FOXI1Q12951 378 aa12.31□□□□□ -0.44
CASC4-208ENST00000559151 TCP11L2Q8N4U5 519 aa12.31□□□□□ -0.44
CASC4-208ENST00000559151 MMS19Q96T76 1030 aa12.31□□□□□ -0.44
CASC4-208ENST00000559151 PDE11AQ9HCR9 933 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms