RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 RABGGTBP53611 331 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 TPTEP56180 551 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 SNX16P57768 344 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 TXNL4AP83876 142 aaKnown RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 TSPY1Q01534 308 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 POU5F1Q01860 360 aaKnown RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 NEXNQ0ZGT2 675 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 MAMLD1Q13495 774 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 DCTN2Q13561 401 aaKnown RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 NAA25Q14CX7 972 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 TBCEQ15813 527 aaPredicted RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 TBCCQ15814 346 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 BAK1Q16611 211 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 CYP2A13Q16696 494 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 AAK1Q2M2I8 961 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 CBWD5Q5RIA9 395 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 UBXN11Q5T124 520 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 TEDDM1Q5T9Z0 273 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 C1QL3Q5VWW1 255 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 NAA35Q5VZE5 725 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 METRNLQ641Q3 311 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 DENND2CQ68D51 928 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 C16orf54Q6UWD8 224 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 TMTC3Q6ZXV5 915 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 RASGRP2Q7LDG7 609 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 TMPRSS6Q8IU80 811 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 DIS3L2Q8IYB7 885 aaKnown RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 CNTROBQ8N137 903 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 NGEFQ8N5V2 710 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 ADAMTS18Q8TE60 1221 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 OVCA2Q8WZ82 227 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 ARRDC3Q96B67 414 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 PTCD3Q96EY7 689 aaKnown RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 TREX2Q9BQ50 279 aaPredicted RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 CINPQ9BW66 212 aaPredicted RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 FTOQ9C0B1 505 aaKnown RBP eCLIP2.53□□□□□ -2
GABPB1-209ENST00000559100 AMBRA1Q9C0C7 1298 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 INTS2Q9H0H0 1204 aaKnown RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 SYNCQ9H7C4 482 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 USP29Q9HBJ7 922 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 PDE11AQ9HCR9 933 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 AKIP1Q9NQ31 210 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 ENTPD2Q9Y5L3 495 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 SLC30A1Q9Y6M5 507 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 TDRD9Q8NDG6 1382 aaKnown RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 XDHP47989 1333 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 CCDC187A0A096LP49 1063 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 LOC105369274A0A096LPK9 316 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 LOC102723532A0A0G2JNH3 316 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 A0A0U1RQG5 324 aaPredicted RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 UNC119BA6NIH7 251 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 SH2D7A6NKC9 451 aaPredicted RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 A8MVJ9 347 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 H3BNC9 293 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 AP4M1O00189 453 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 GRM8O00222 908 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 SYN3O14994 580 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 DHHO43323 396 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 ORC4O43929 436 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 CBFA2T3O75081 653 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 TULP3O75386 442 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 TSPAN9O75954 239 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 TMEM63AO94886 807 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 SCGB1D1O95968 90 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 ALDOAP04075 364 aaKnown RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 KRT1P04264 644 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 RHOP08100 348 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 CHRM2P08172 466 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 ELANEP08246 267 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 UBL4AP11441 157 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 ACP5P13686 325 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 CHN1P15882 459 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 ADRA1DP25100 572 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 DDX6P26196 483 aaKnown RBP eCLIP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 IGHMBP2P38935 993 aaKnown RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 GPD2P43304 727 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 CPA2P48052 419 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 VAV2P52735 878 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 RARSP54136 660 aaKnown RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 CDH15P55291 814 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 FAM3BP58499 235 aaPredicted RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 TAS2R50P59544 299 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 RPS3AP61247 264 aaKnown RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 RPL15P61313 204 aaKnown RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 E2F1Q01094 437 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 CALD1Q05682 793 aaKnown RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 ITIH3Q06033 890 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 MTAPQ13126 283 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 CUL4AQ13619 759 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 FHL3Q13643 280 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 EIF4A2Q14240 407 aaKnown RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 RRP1BQ14684 758 aaKnown RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 WTAPQ15007 396 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 MEA1Q16626 185 aa2.52□□□□□ -2.01
GABPB1-209ENST00000559100 TBC1D10BQ4KMP7 808 aaPredicted RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 AASDHQ4L235 1098 aaPredicted RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 FAM133BQ5BKY9 247 aaKnown RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 B3GNTL1Q67FW5 361 aaPredicted RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 NAIF1Q69YI7 327 aaPredicted RBP2.52□□□□□ -2.01
GABPB1-209ENST00000559100 SP5Q6BEB4 398 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms