RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 CCSER2Q9H7U1 834 aa21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 TLR8Q9NR97 1041 aaKnown RBP21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 OR12D3Q9UGF7 316 aa21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 XPO7Q9UIA9 1087 aaKnown RBP21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 YIPF1Q9Y548 306 aa21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 H3BRJ5 948 aa21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 PRRG1O14668 218 aa21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 LILRB3O75022 631 aa21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 MOCS2O96007 188 aaPredicted RBP21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 CNPP09543 421 aaKnown RBP21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 AIF1P55008 147 aa21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 LMNB2Q03252 620 aa21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 SEMA3BQ13214 749 aa21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 DARS2Q6PI48 645 aaKnown RBP21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 RFX8Q6ZV50 586 aa21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 TAB3Q8N5C8 712 aaPredicted RBP21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 TSEN2Q8NCE0 465 aaKnown RBP21.13■□□□□ 0.97
SNRPA1-205ENST00000558036 H7C0C1 242 aa21.12■□□□□ 0.97
SNRPA1-205ENST00000558036 MAP2K7O14733 419 aa21.12■□□□□ 0.97
SNRPA1-205ENST00000558036 ATP5OP48047 213 aa21.12■□□□□ 0.97
SNRPA1-205ENST00000558036 C10orf120Q5SQS8 335 aa21.12■□□□□ 0.97
SNRPA1-205ENST00000558036 EIF1ADQ8N9N8 165 aaKnown RBP21.12■□□□□ 0.97
SNRPA1-205ENST00000558036 SP7Q8TDD2 431 aaPredicted RBP21.12■□□□□ 0.97
SNRPA1-205ENST00000558036 FMO2Q99518 471 aa21.12■□□□□ 0.97
SNRPA1-205ENST00000558036 HTATIP2Q9BUP3 242 aa21.12■□□□□ 0.97
SNRPA1-205ENST00000558036 FRMD8P1Q9BZ68 369 aaPredicted RBP21.12■□□□□ 0.97
SNRPA1-205ENST00000558036 PLXNA3P51805 1871 aa21.12■□□□□ 0.97
SNRPA1-205ENST00000558036 GRXCR1A8MXD5 290 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 ARHGEF15O94989 841 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 CTSAP10619 480 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 CCR1P32246 355 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 CTNNB1P35222 781 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 DPYSQ14117 519 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 P3H1Q32P28 736 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 TMC7Q7Z402 723 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 CCDC89Q8N998 374 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 RSAD2Q8WXG1 361 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 SNF8Q96H20 258 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 SERPINB11Q96P15 392 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 DTLQ9NZJ0 730 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 RCOR3Q9P2K3 495 aaPredicted RBP21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 CARNS1A5YM72 827 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 MFSD11O43934 449 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 PAGE1O75459 146 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 SRGAP2BP0DMP2 458 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 HMGA1P17096 107 aaKnown RBP21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 ALDH1A3P47895 512 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 TPI1P60174 286 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 CALCOCO2Q13137 446 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 C9orf50Q5SZB4 431 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 FAM109BQ6ICB4 259 aaPredicted RBP21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 MSANTD2Q6P1R3 559 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 TP53INP2Q8IXH6 220 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 ZNF512Q96ME7 567 aaPredicted RBP21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 C17orf80Q9BSJ5 609 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 TTLL2Q9BWV7 592 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 ARHGEF38Q9NXL2 777 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 CLIC5Q9NZA1 410 aa21.11■□□□□ 0.97
SNRPA1-205ENST00000558036 LRIG2O94898 1065 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 CXCL14O95715 111 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 ITGA8P53708 1063 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 ERVFC1P60507 584 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 TWF1Q12792 350 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 GPS1Q13098 491 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 ART4Q93070 314 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 NR2E3Q9Y5X4 410 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 TLR5O60602 858 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 HMBSP08397 361 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 ZDHHC11BP0C7U3 371 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 ELF1P32519 619 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 PHOSPHO2Q8TCD6 241 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 TCF25Q9BQ70 676 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 MARCH2Q9P0N8 246 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 HPCAL4Q9UM19 191 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 TLR6Q9Y2C9 796 aa21.1■□□□□ 0.97
SNRPA1-205ENST00000558036 TGM5O43548 720 aa21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 ZFXP17010 805 aaPredicted RBP21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 ERCC2P18074 760 aa21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 DNAJB1P25685 340 aa21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 RBL1P28749 1068 aa21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 BMPR1AP36894 532 aa21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 PSEN1P49768 467 aa21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 PLD1Q13393 1074 aa21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 BRMS1LQ5PSV4 323 aa21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 PWWP2AQ96N64 755 aa21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 WHRNQ9P202 907 aa21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 FNIP2Q9P278 1114 aa21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 ZNF638Q14966 1978 aaKnown RBP21.09■□□□□ 0.97
SNRPA1-205ENST00000558036 LINC01553A4QN01 128 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 KCNU1A8MYU2 1149 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 KCNN4O15554 427 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 EPHB2P29323 1055 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 TBX4P57082 545 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 NNTQ13423 1086 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 TAF12Q16514 161 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 IZUMO3Q5VZ72 239 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms